RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 IL10RBQ08334 325 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 ILF2Q12905 390 aaKnown RBP14.52□□□□□ -0.08
MSH5-201ENST00000375703 SEMA3AQ14563 771 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 RAP1GAP2Q684P5 730 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 FBXL22Q6P050 247 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 GPR150Q8NGU9 434 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 TMIGD2Q96BF3 282 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 KCNA7Q96RP8 456 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 ANKRD60Q9BZ19 345 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 TRIM15Q9C019 465 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 FBXO44Q9H4M3 255 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 GID8Q9NWU2 228 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 TMCO1Q9UM00 188 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 PCDHB8Q9UN66 801 aa14.52□□□□□ -0.08
MSH5-201ENST00000375703 SAC3D1A6NKF1 404 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 AQP12BA6NM10 295 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 RAMP2O60895 175 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 TRMUO75648 421 aaKnown RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 TBX18O95935 607 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 HGFP14210 728 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 ZNF37AP17032 561 aaPredicted RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 HOXB8P17481 243 aaPredicted RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 LBPP18428 481 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 CAPN3P20807 821 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 PBX3P40426 434 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 ATP6V0D1P61421 351 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 PLOD1Q02809 727 aaPredicted RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 ACVR1Q04771 509 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 CAPRIN1Q14444 709 aaKnown RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 INPP5AQ14642 412 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 AQP12AQ8IXF9 295 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 OR13C4Q8NGS5 318 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 RHEBL1Q8TAI7 183 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 CLK4Q9HAZ1 481 aaKnown RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 GMIPQ9P107 970 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 ABCD2Q9UBJ2 740 aa14.52□□□□□ -0.09
MSH5-201ENST00000375703 RSL24D1Q9UHA3 163 aaKnown RBP14.52□□□□□ -0.09
MSH5-201ENST00000375703 TTC3P53804 2025 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 IGLV3-10A0A075B6K4 115 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 FAM155AB1AL88 458 aaPredicted RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 H3BMM5 538 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 PDLIM1O00151 329 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 CLASP2O75122 1294 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 RPP40O75818 363 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 PIRTP0C851 137 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 FKBP1BP68106 108 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 TNK2Q07912 1038 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 DSC3Q14574 896 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 KANK2Q63ZY3 851 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 CAMK1DQ8IU85 385 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 OR4L1Q8NH43 312 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 BRSK1Q8TDC3 778 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 TFAP2CQ92754 450 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 BTN2A3PQ96KV6 586 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 ATOH8Q96SQ7 321 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 POLR1EQ9GZS1 481 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 TUBB1Q9H4B7 451 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 TFB2MQ9H5Q4 396 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 CATSPERZQ9NTU4 200 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 HSFX1Q9UBD0 423 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 SLC8A2Q9UPR5 921 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 BTRCQ9Y297 605 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 DHRS12A0PJE2 317 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 HMBSP08397 361 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 HSD17B1P14061 328 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 HLA-DPA1P20036 260 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 GRK4P32298 578 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 ALDH3B2P48448 385 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 SUOXP51687 545 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 SERINC3Q13530 473 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 GALNT3Q14435 633 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 CIR1Q86X95 450 aaPredicted RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 MIB1Q86YT6 1006 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 PHYKPLQ8IUZ5 450 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 DCP1BQ8IZD4 617 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 FAM47BQ8NA70 645 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 DIS3LQ8TF46 1054 aaKnown RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 LRRC58Q96CX6 371 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 RPRD1AQ96P16 312 aaPredicted RBP14.51□□□□□ -0.09
MSH5-201ENST00000375703 POPDC3Q9HBV1 291 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 CMTM6Q9NX76 183 aa14.51□□□□□ -0.09
MSH5-201ENST00000375703 MATN4O95460 622 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 FGF1P05230 155 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 OR1E1P30953 314 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 ACVRL1P37023 503 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 CLCQ05315 142 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 CBR4Q8N4T8 237 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 PEX13Q92968 403 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.5□□□□□ -0.09
MSH5-201ENST00000375703 FEM1CQ96JP0 617 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 AARSD1Q9BTE6 412 aaKnown RBP14.5□□□□□ -0.09
MSH5-201ENST00000375703 TIMMDC1Q9NPL8 285 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 SDR39U1Q9NRG7 319 aaPredicted RBP14.5□□□□□ -0.09
MSH5-201ENST00000375703 POLG2Q9UHN1 485 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 SQORQ9Y6N5 450 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 MIA3Q5JRA6 1907 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 FAM149AA5PLN7 773 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 CRCPO75575 148 aa14.5□□□□□ -0.09
MSH5-201ENST00000375703 SLC6A2P23975 617 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms