RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 KRT6AP02538 564 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 KRT6BP04259 564 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CYP2A7P20853 494 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 KRT6CP48668 564 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SPIBQ01892 262 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SETD9Q8NE22 299 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 KCNA7Q96RP8 456 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 GPR21Q99679 349 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ALG2Q9H553 416 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 GIMAP2Q9UG22 337 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EIF2B4Q9UI10 523 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 C10orf71Q711Q0 1435 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 COL1A2P08123 1366 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 NHSQ6T4R5 1651 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RREB1Q92766 1687 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 YJEFN3A6XGL0 299 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 E7ENX8 843 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TRAFD1O14545 582 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EDIL3O43854 480 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RPP40O75818 363 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EGFLAMQ63HQ2 1017 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CPSF7Q8N684 471 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SCAMP5Q8TAC9 235 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 FBXL20Q96IG2 436 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 REEP1Q9H902 201 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TOR4AQ9NXH8 423 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 GALNT8Q9NY28 637 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ATP6V1HQ9UI12 483 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 BBIP1A8MTZ0 92 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RTN3O95197 1032 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 NTRK1P04629 796 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 DDX5P17844 614 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EFNA1P20827 205 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 GCAP28676 217 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 PFKPQ01813 784 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CNTN1Q12860 1018 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 INAQ16352 499 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 LIX1Q8N485 282 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 NTPCRQ9BSD7 190 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ABHD16BQ9H3Z7 469 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 HMG20AQ9NP66 347 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TRPM5Q9NZQ8 1165 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CNOT3O75175 753 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EGFRP00533 1210 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 IMPDH2P12268 514 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 AQP1P29972 269 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 IDH2P48735 452 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CRTC3Q6UUV7 619 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 UNC93B1Q9H1C4 597 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 POLR3BQ9NW08 1133 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF490Q9ULM2 529 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 PTGDR2Q9Y5Y4 395 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ARL5CA6NH57 179 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 BCKDKO14874 412 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF7P17097 686 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CENPAP49450 140 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ST13P50502 369 aaKnown RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ST8SIA6P61647 398 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF846Q147U1 533 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ANKRD46Q86W74 232 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TRIM69Q86WT6 500 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 LRRC52Q8N7C0 313 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 CNTD1Q8N815 330 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-202ENST00000375340 RASSF1Q9NS23 344 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SHANK3Q9BYB0 1731 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 MYBPHLA2RUH7 354 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EFCAB10A6NFE3 127 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 H3BN98 237 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SERPINI2O75830 405 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ANXA6P08133 673 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 EPB42P16452 691 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ITPKAP23677 461 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 IVDP26440 423 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 PLA2G4EQ3MJ16 856 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ARMC12Q5T9G4 340 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 OR4K2Q8NGD2 314 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SELENOMQ8WWX9 145 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 ABHD8Q96I13 439 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TRPC4Q9UBN4 977 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 SIX4Q9UIU6 781 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 TMCC3Q9ULS5 477 aa6.53□□□□□ -1.36
SMC1A-202ENST00000375340 MFN2O95140 757 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 SLC18A1P54219 525 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 HPCAP84074 193 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 CAMK2GQ13555 558 aaPredicted RBP6.52□□□□□ -1.36
SMC1A-202ENST00000375340 TSNQ15631 228 aaKnown RBP6.52□□□□□ -1.36
SMC1A-202ENST00000375340 RBM20Q5T481 1227 aaKnown RBP6.52□□□□□ -1.36
SMC1A-202ENST00000375340 TYW3Q6IPR3 259 aaKnown RBP6.52□□□□□ -1.36
SMC1A-202ENST00000375340 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 SEPT8Q92599 483 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 ASB8Q9H765 288 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 DOLKQ9UPQ8 538 aa6.52□□□□□ -1.36
SMC1A-202ENST00000375340 PRR23D1E9PI22 279 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CKMP06732 381 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TFPTP0C1Z6 253 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms