RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 TAB3Q8N5C8 712 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TSACCQ96A04 125 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 WDR92Q96MX6 357 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 OSBPL9Q96SU4 736 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 APOL2Q9BQE5 337 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TEX101Q9BY14 249 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TCEAL2Q9H3H9 227 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FAM83DQ9H4H8 585 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GOLGA6AQ9NYA3 693 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TTC7AQ9ULT0 858 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ASCC3Q8N3C0 2202 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TMEM202A6NGA9 273 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SOD1P00441 154 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ETS1P14921 441 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PPARDQ03181 441 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ALG11Q2TAA5 492 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KCTD11Q693B1 232 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HEATR4Q86WZ0 1026 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PHACTR4Q8IZ21 702 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RBFAQ8N0V3 343 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TTC30BQ8N4P2 665 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 EID2Q8N6I1 236 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PRELID2Q8N945 189 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 BAHD1Q8TBE0 780 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TRABDQ9H4I3 376 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PHPT1Q9NRX4 125 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HOMER3Q9NSC5 361 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SNX12Q9UMY4 172 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 LAMA1P25391 3075 aa20.91■□□□□ 0.94
MAP1LC3A-202ENST00000374837 USP24Q9UPU5 2620 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 H3BM21 787 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SLC4A1P02730 911 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KCNJ1P48048 391 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SRP54P61011 504 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CDK3Q00526 305 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TRIP6Q15654 476 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 INAVAQ3KP66 663 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KCTD16Q68DU8 428 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ADAMTSL4Q6UY14 1074 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HID1Q8IV36 788 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GLIS1Q8NBF1 620 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GPR26Q8NDV2 337 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ATL2Q8NHH9 583 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 BLOC1S5Q8TDH9 187 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 BTN2A2Q8WVV5 523 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TBL1YQ9BQ87 522 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SMARCAL1Q9NZC9 954 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HACD3Q9P035 362 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KLQ9UEF7 1012 aa20.9■□□□□ 0.94
MAP1LC3A-202ENST00000374837 LRRK1Q38SD2 2015 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 SPAARA0A1B0GVQ0 90 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 PDE2AO00408 941 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 PSMD3O43242 534 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 USP12O75317 370 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 MYCLP1P12525 358 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 KELP23276 732 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 HENMT1Q5T8I9 393 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 DENND5AQ6IQ26 1287 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 RD3Q7Z3Z2 195 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 PDCD7Q8N8D1 485 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ZNF548Q8NEK5 533 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 OR56A4Q8NGH8 313 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 LMX1AQ8TE12 382 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 OR1E3Q8WZA6 343 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 SLC13A1Q9BZW2 595 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ETNK1Q9HBU6 452 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 FGF22Q9HCT0 170 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 BPIFA1Q9NP55 256 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 RAD18Q9NS91 495 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 KCND1Q9NSA2 647 aa20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 APOBEC3BQ9UH17 382 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-202ENST00000374837 TMEM131Q92545 1883 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 TRIM38O00635 465 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 TNFRSF10CO14798 259 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ZNF185O15231 689 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 RASGRP1O95267 797 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 PYGLP06737 847 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ZSCAN5DPP0CG00 497 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 GIMD1P0DJR0 217 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 BPIP17213 487 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 RPL22P35268 128 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ACTN2P35609 894 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 HMGCLP35914 325 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 FDFT1P37268 417 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 BLKP51451 505 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 HK3P52790 923 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 MSLNQ13421 630 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 C1orf61Q13536 156 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 C17orf53Q8N3J3 647 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 CCDC89Q8N998 374 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ACTRT1Q8TDG2 376 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 CDC6Q99741 560 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 AP1M1Q9BXS5 423 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 LRRC40Q9H9A6 602 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ARNT2Q9HBZ2 717 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 MRPL40Q9NQ50 206 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 SPASTQ9UBP0 616 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 CNOT6Q9ULM6 557 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 DGKBQ9Y6T7 804 aa20.88■□□□□ 0.93
MAP1LC3A-202ENST00000374837 ZFHX4Q86UP3 3567 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms