RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SNRNP27Q8WVK2 155 aaKnown RBP16.91■□□□□ 0.3
PHF1-202ENST00000374516 SLCO4A1Q96BD0 722 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 RMND5BQ96G75 393 aaPredicted RBP16.91■□□□□ 0.3
PHF1-202ENST00000374516 TSNARE1Q96NA8 513 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 SLC25A51Q9H1U9 297 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 TBX21Q9UL17 535 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 SNX13Q9Y5W8 968 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 BACE2Q9Y5Z0 518 aa16.91■□□□□ 0.3
PHF1-202ENST00000374516 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 A0A0D9SEW6 157 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 ZNF840PA6NDX5 716 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 TARM1B6A8C7 271 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 PHGDHO43175 533 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 COCHO43405 550 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 DLX3O60479 287 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 PARNO95453 639 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 MAGEA8P43361 318 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 CTBP1Q13363 440 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 CNKSR3Q6P9H4 555 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 GK5Q6ZS86 529 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 DENND1CQ8IV53 801 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 DENND6AQ8IWF6 608 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 RNF168Q8IYW5 571 aaPredicted RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 PGBD5Q8N414 524 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 IMP4Q96G21 291 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 MAELQ96JY0 434 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 RANBP9Q96S59 729 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 GPR22Q99680 433 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 FAF1Q9UNN5 650 aaPredicted RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 SH3BP1Q9Y3L3 701 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 ACTL7AQ9Y615 435 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 F5H5T6 163 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 ITGB8P26012 769 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 USP10Q14694 798 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 MTX3Q5HYI7 312 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 KDELC1Q6UW63 502 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 HERC6Q8IVU3 1022 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 PPHLN1Q8NEY8 458 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 HM13Q8TCT9 377 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 TRPC4APQ8TEL6 797 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 KCTD4Q8WVF5 259 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 LPGAT1Q92604 370 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 CIB1Q99828 191 aa16.9■□□□□ 0.3
PHF1-202ENST00000374516 NOL11Q9H8H0 719 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 CLK4Q9HAZ1 481 aaKnown RBP16.9■□□□□ 0.3
PHF1-202ENST00000374516 TMEM233B4DJY2 109 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 PLOD2O00469 737 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 SCAMP3O14828 347 aaKnown RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 MMP2P08253 660 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 ARNTP27540 789 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 GABRB3P28472 473 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 RPS24P62847 133 aaKnown RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 SERINC3Q13530 473 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 TAF12Q16514 161 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 ZC3HC1Q86WB0 502 aaKnown RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 PNPLA1Q8N8W4 532 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 TMEM169Q96HH4 297 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 RNF38Q9H0F5 515 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 PLGRKTQ9HBL7 147 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 SLC8A2Q9UPR5 921 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 TCAF1Q9Y4C2 921 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 ZFP37Q9Y6Q3 630 aaPredicted RBP16.89■□□□□ 0.29
PHF1-202ENST00000374516 TANC1Q9C0D5 1861 aa16.89■□□□□ 0.29
PHF1-202ENST00000374516 SH3PXD2BA1X283 911 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 TRPC5OSA6NMA1 111 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 SDHDO14521 159 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 TRIM24O15164 1050 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 HTRA2O43464 458 aaPredicted RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 ACSL4O60488 711 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 BMP10O95393 424 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 AHSGP02765 367 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 KLKB1P03952 638 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 SOD2P04179 222 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 SLC35E2BP0CK96 405 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 IRF1P10914 325 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 SLC7A1P30825 629 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 AVPR1AP37288 418 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 NUP107P57740 925 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 MPP1Q00013 466 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 TRAP1Q12931 704 aaKnown RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 STX5Q13190 355 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 PLD1Q13393 1074 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 SLC12A1Q13621 1099 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 LRP8Q14114 963 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 HECTD3Q5T447 861 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 CCNYL1Q8N7R7 359 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 DUS3LQ96G46 650 aaKnown RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 UHRF1Q96T88 793 aaPredicted RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 ANKRD60Q9BZ19 345 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 OSBPL6Q9BZF3 934 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 TCRBV3S1A0A5B6 114 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 C2orf78A6NCI8 922 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms