RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 UBTFL6P0CB48 400 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 CES1P23141 567 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 ALDH1A3P47895 512 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 PSME3P61289 254 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 ZNF177Q13360 481 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-204ENST00000372064 CYTH1Q15438 398 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 REP15Q6BDI9 236 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 SEZ6LQ9BYH1 1024 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 BACE2Q9Y5Z0 518 aa20.53■□□□□ 0.88
VEGFA-204ENST00000372064 UBA6A0AVT1 1052 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 UBXN8O00124 270 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 RNASEH1O60930 286 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 GPC4O75487 556 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 GNRH1P01148 92 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 F11P03951 625 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 PIM1P11309 404 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 MSX2P35548 267 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 CDH13P55290 713 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 MRPS22P82650 360 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 AGKQ53H12 422 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 GLT6D1Q7Z4J2 308 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 TCF12Q99081 682 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 DERL2Q9GZP9 239 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 UNC93B1Q9H1C4 597 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 SYTL2Q9HCH5 934 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 SCUBE2Q9NQ36 999 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 TRPM5Q9NZQ8 1165 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 PDP2Q9P2J9 529 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 AFF4Q9UHB7 1163 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 AGO1Q9UL18 857 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 TBC1D30Q9Y2I9 924 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 ASB3Q9Y575 518 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 PCDHGC4Q9Y5F7 938 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 C2orf78A6NCI8 922 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 CDK14O94921 469 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 SNRPB2P08579 225 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 ACADVLP49748 655 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 PLD1Q13393 1074 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 RAB44Q7Z6P3 723 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 RNF148Q8N7C7 305 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 KIAA1191Q96A73 305 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 C3orf30Q96M34 536 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 BTBD9Q96Q07 612 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 SUCOQ9UBS9 1254 aaKnown RBP20.52■□□□□ 0.88
VEGFA-204ENST00000372064 RIMS3Q9UJD0 308 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 DNAJC15Q9Y5T4 150 aa20.52■□□□□ 0.88
VEGFA-204ENST00000372064 SCAMP3O14828 347 aaKnown RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 KERAO60938 352 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 MT-CO1P00395 513 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 ASB9Q96DX5 294 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 IGSF21Q96ID5 467 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 ZBED2Q9BTP6 218 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 MRPL40Q9NQ50 206 aaKnown RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 CCDC167Q9P0B6 97 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 A0A1B0GVM2 712 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 SIX3O95343 332 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 ATN1P54259 1190 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 ADGRE1Q14246 886 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 C8orf82Q6P1X6 216 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 RNF168Q8IYW5 571 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 LPCAT1Q8NF37 534 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 SLC25A23Q9BV35 468 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 SPATS2LQ9NUQ6 558 aaKnown RBP20.51■□□□□ 0.87
VEGFA-204ENST00000372064 TAS2R13Q9NYV9 303 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 GBF1Q92538 1859 aa20.51■□□□□ 0.87
VEGFA-204ENST00000372064 LRRC14BA6NHZ5 514 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 TRIM24O15164 1050 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 VCLP18206 1134 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PFKFB4Q16877 469 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 ADGRF1Q5T601 910 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 RNF219Q5W0B1 726 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 KANK2Q63ZY3 851 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 HACD2Q6Y1H2 254 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 TUBGCP5Q96RT8 1024 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 HIPK3Q9H422 1215 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 SMPD4Q9NXE4 827 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 FAM50BQ9Y247 325 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PRSS51A0A1B0GVH4 220 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 LCHNA4D1U4 455 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 C2orf81A6NN90 581 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 RHOBTB1O94844 696 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 CAPNS1P04632 268 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 ALDOCP09972 364 aaKnown RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 FMO4P31512 558 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 CXorf57Q6NSI4 855 aaKnown RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 LINGO4Q6UY18 593 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 ZNF461Q8TAF7 563 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 TOP1MTQ969P6 601 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 MYRFLQ96LU7 910 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 KLHL32Q96NJ5 620 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 MUC3BQ9H195 1237 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 DTNAQ9Y4J8 743 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 ATP6AP2A0A1C7CYW4 349 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 E7ENX8 843 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PPP6CO00743 305 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 ATP6AP2O75787 350 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 CDKN1CP49918 316 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-204ENST00000372064 MED21Q13503 144 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 PTPRRQ15256 657 aa20.5■□□□□ 0.87
VEGFA-204ENST00000372064 MMEL1Q495T6 779 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms