RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GBA3Q9H227 469 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 PRORYQ9H606 182 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 ERVMER34-1Q9H9K5 563 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 XAB2Q9HCS7 855 aaKnown RBP10.02□□□□□ -0.81
TPM3-210ENST00000368530 UBP1Q9NZI7 540 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 ZC3H7BQ9UGR2 993 aaKnown RBP10.02□□□□□ -0.81
TPM3-210ENST00000368530 RABGEF1Q9UJ41 708 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 TRHDEQ9UKU6 1024 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 PCDHGA10Q9Y5H3 936 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 RAI2Q9Y5P3 530 aa10.02□□□□□ -0.81
TPM3-210ENST00000368530 MYLKQ15746 1914 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 EDDM13A0A1B0GTR0 161 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 WASH4PA8MWX3 477 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 RASA4BC9J798 803 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 F5H5T6 163 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 TLR4O00206 839 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 RASA4O43374 803 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 MAFKO60675 156 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 RNASEH1O60930 286 aaKnown RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 RFPL3O75679 317 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 TCEA3O75764 348 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ZNF189O75820 626 aaPredicted RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 NEBLO76041 1014 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 PRB1P04280 392 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 CDK4P11802 303 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 CCNB1P14635 433 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 JUPP14923 745 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 C5AR1P21730 350 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 CCNCP24863 283 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 MGAT1P26572 445 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 STK19P49842 368 aaPredicted RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 SKOR1P84550 965 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ECT2LQ008S8 904 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 INAVAQ3KP66 663 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 TEX44Q53QW1 395 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 CASC4Q6P4E1 433 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 GANCQ8TET4 914 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ALG14Q96F25 216 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 TEKT5Q96M29 485 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 TSGA13Q96PP4 275 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 OMDQ99983 421 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 MLPHQ9BV36 600 aaPredicted RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 NRSN2Q9GZP1 204 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 RABEP2Q9H5N1 569 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 EIF2B3Q9NR50 452 aaKnown RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 TMEM248Q9NWD8 314 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 PPARGC1AQ9UBK2 798 aaKnown RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 IPO11Q9UI26 975 aaKnown RBP10.01□□□□□ -0.81
TPM3-210ENST00000368530 SARDHQ9UL12 918 aa10.01□□□□□ -0.81
TPM3-210ENST00000368530 IGLV3-10A0A075B6K4 115 aa10□□□□□ -0.81
TPM3-210ENST00000368530 DRGXA6NNA5 263 aa10□□□□□ -0.81
TPM3-210ENST00000368530 J3KR12 359 aa10□□□□□ -0.81
TPM3-210ENST00000368530 MATN3O15232 486 aa10□□□□□ -0.81
TPM3-210ENST00000368530 CDH16O75309 829 aa10□□□□□ -0.81
TPM3-210ENST00000368530 CREB1P16220 341 aa10□□□□□ -0.81
TPM3-210ENST00000368530 MZF1P28698 734 aaPredicted RBP10□□□□□ -0.81
TPM3-210ENST00000368530 ATP5DP30049 168 aa10□□□□□ -0.81
TPM3-210ENST00000368530 MAGEA3P43357 314 aa10□□□□□ -0.81
TPM3-210ENST00000368530 ABCG1P45844 678 aa10□□□□□ -0.81
TPM3-210ENST00000368530 PSMD8P48556 350 aa10□□□□□ -0.81
TPM3-210ENST00000368530 PLK1P53350 603 aa10□□□□□ -0.81
TPM3-210ENST00000368530 GEMIN4P57678 1058 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 CDH18Q13634 790 aa10□□□□□ -0.81
TPM3-210ENST00000368530 PRPSAP1Q14558 356 aa10□□□□□ -0.81
TPM3-210ENST00000368530 HES3Q5TGS1 186 aa10□□□□□ -0.81
TPM3-210ENST00000368530 LRRC8BQ6P9F7 803 aa10□□□□□ -0.81
TPM3-210ENST00000368530 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
TPM3-210ENST00000368530 UNC5AQ6ZN44 842 aa10□□□□□ -0.81
TPM3-210ENST00000368530 ZNF771Q7L3S4 317 aaPredicted RBP10□□□□□ -0.81
TPM3-210ENST00000368530 PRPF39Q86UA1 669 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 EXOC3L1Q86VI1 746 aa10□□□□□ -0.81
TPM3-210ENST00000368530 CACTIN-AS1Q8N1I8 211 aa10□□□□□ -0.81
TPM3-210ENST00000368530 UMODL1-AS1Q8N2C9 162 aa10□□□□□ -0.81
TPM3-210ENST00000368530 CNTD1Q8N815 330 aa10□□□□□ -0.81
TPM3-210ENST00000368530 MFSD2AQ8NA29 543 aa10□□□□□ -0.81
TPM3-210ENST00000368530 OR52K2Q8NGK3 314 aa10□□□□□ -0.81
TPM3-210ENST00000368530 OR52K1Q8NGK4 314 aa10□□□□□ -0.81
TPM3-210ENST00000368530 OR14C36Q8NHC7 312 aa10□□□□□ -0.81
TPM3-210ENST00000368530 PIP4K2CQ8TBX8 421 aa10□□□□□ -0.81
TPM3-210ENST00000368530 ARHGEF2Q92974 986 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 NXPE2Q96DL1 559 aa10□□□□□ -0.81
TPM3-210ENST00000368530 SERAC1Q96JX3 654 aa10□□□□□ -0.81
TPM3-210ENST00000368530 SIGLEC10Q96LC7 697 aa10□□□□□ -0.81
TPM3-210ENST00000368530 VAT1Q99536 393 aa10□□□□□ -0.81
TPM3-210ENST00000368530 EBNA1BP2Q99848 306 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 DDX50Q9BQ39 737 aaKnown RBP10□□□□□ -0.81
TPM3-210ENST00000368530 SP110Q9HB58 689 aa10□□□□□ -0.81
TPM3-210ENST00000368530 AASDHPPTQ9NRN7 309 aa10□□□□□ -0.81
TPM3-210ENST00000368530 RBM22Q9NW64 420 aaKnown RBP eCLIP10□□□□□ -0.81
TPM3-210ENST00000368530 LGALS13Q9UHV8 139 aa10□□□□□ -0.81
TPM3-210ENST00000368530 ARID1BQ8NFD5 2236 aaPredicted RBP10□□□□□ -0.81
TPM3-210ENST00000368530 FLNBO75369 2602 aaKnown RBP9.99□□□□□ -0.81
TPM3-210ENST00000368530 TCRBV9S1A1TA0A576 114 aa9.99□□□□□ -0.81
TPM3-210ENST00000368530 YKT6O15498 198 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms