RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 HMGCS2P54868 508 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SLC8A3P57103 927 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 RAP2BP61225 183 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 GNAI1P63096 354 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 RPP38P78345 283 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ZXDAP98168 799 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 STK4Q13043 487 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 RPA4Q13156 261 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SLC13A2Q13183 592 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 CTBP1Q13363 440 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 MPP3Q13368 585 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 UBXN2BQ14CS0 331 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 KRT24Q2M2I5 525 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SLC35G1Q2M3R5 365 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ADCK5Q3MIX3 580 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 XKR3Q5GH77 459 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 PRAMEF19Q5SWL8 479 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 CYP4A22Q5TCH4 519 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 OR7E24Q6IFN5 339 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SLC25A24Q6NUK1 477 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 PAPD4Q6PIY7 484 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 C6orf89Q6UWU4 347 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 MRPL10Q7Z7H8 261 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 LUZP1Q86V48 1076 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 CD302Q8IX05 232 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 TMEM199Q8N511 208 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 RNF10Q8N5U6 811 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 RNF169Q8NCN4 708 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 GPRC5AQ8NFJ5 357 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 KIF18AQ8NI77 898 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 FAM151AQ8WW52 585 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 TFAP2CQ92754 450 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SMARCE1Q969G3 411 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 INTS12Q96CB8 462 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ZNF653Q96CK0 615 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 SH3GL2Q99962 352 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 THUMPD3Q9BV44 507 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ISCUQ9H1K1 167 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 CARD9Q9H257 536 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 DPH5Q9H2P9 285 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 GSTO2Q9H4Y5 243 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 HAUS4Q9H6D7 363 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 GPR35Q9HC97 309 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 POLE3Q9NRF9 147 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 MYO1AQ9UBC5 1043 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ANAPC5Q9UJX4 755 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 AGAP1Q9UPQ3 857 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 ASB3Q9Y575 518 aa5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 COL11A1P12107 1806 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-204ENST00000368292 EME2A4GXA9 379 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CCDC151A5D8V7 595 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 TTC34A8MYJ7 566 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 NPIPB8E9PQR5 432 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 NDUFS8O00217 210 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 SYT5O00445 386 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 TRIM38O00635 465 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 SCAMP1O15126 338 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 NARSO43776 548 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 PLA2G6O60733 806 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 ZC3H11AO75152 810 aaKnown RBP eCLIP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CNMDO75829 334 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 HAUS5O94927 633 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 UNC5CO95185 931 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 GGPS1O95749 300 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 PGK1P00558 417 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 POMCP01189 267 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 ZFYP08048 801 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 ARP10275 920 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CCNA2P20248 432 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 TACR2P21452 398 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC6A2P23975 617 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 ACAT1P24752 427 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 APOBEC3AP31941 199 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 RPL9P32969 192 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 GP5P40197 560 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 DHPSP49366 369 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 NT5C2P49902 561 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CDK7P50613 346 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 GBX2P52951 348 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CARD18P57730 90 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 B2MP61769 119 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 YWHAZP63104 245 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 NOP14P78316 857 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 BYSLQ13895 437 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 WDR43Q15061 677 aaKnown RBP eCLIP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 PFKFB3Q16875 520 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 LSM12Q3MHD2 195 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CRB2Q5IJ48 1285 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC9C2Q5TAH2 1124 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 PDPK2PQ6A1A2 396 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 EFCAB12Q6NXP0 572 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 MTFR2Q6P444 385 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC30A9Q6PML9 568 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 CACNA2D4Q7Z3S7 1137 aa5.15□□□□□ -1.59
ECHDC1-204ENST00000368292 RABEPKQ7Z6M1 372 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms