RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 KRT24Q2M2I5 525 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CDONQ4KMG0 1287 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SIGIRRQ6IA17 410 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CCDC70Q6NSX1 233 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 FAM122CQ6P4D5 195 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CYP20A1Q6UW02 462 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 GFRALQ6UXV0 394 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 DPPA4Q7L190 304 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CUZD1Q86UP6 607 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SFR1Q86XK3 245 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 NAGSQ8N159 534 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCDH20Q8N6Y1 951 aaKnown RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM116Q8NCL8 245 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 OR14L1PQ8NHC6 308 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 HMGCLL1Q8TB92 370 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SLC20A1Q8WUM9 679 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SECTM1Q8WVN6 248 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ABTB1Q969K4 478 aaPredicted RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 EVI5LQ96CN4 794 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ORAI1Q96D31 301 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 WDFY2Q96P53 400 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ACOX2Q99424 681 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 PDCL3Q9H2J4 239 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 EVA1AQ9H8M9 152 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 POLR1BQ9H9Y6 1135 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SLC28A3Q9HAS3 691 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ACSS1Q9NUB1 689 aaPredicted RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ICAM5Q9UMF0 924 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 VDAC3Q9Y277 283 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCDHAC2Q9Y5I4 1007 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CGNL1Q0VF96 1302 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 A0A087WYN8 130 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 A0A1W2PRG0 241 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 GOLGA6L9A6NEM1 432 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM63AO94886 807 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 EGFP01133 1207 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 F7P08709 466 aaPredicted RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 ITGA2P17301 1181 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 DGKAP23743 735 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 RRM1P23921 792 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 CORO1AP31146 461 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 BSGP35613 385 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMPOP42166 694 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 RPS3AP61247 264 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 CSNK2A1P68400 391 aaPredicted RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 POU3F1Q03052 451 aaPredicted RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 DPCR1Q3MIW9 517 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 KCNT1Q5JUK3 1230 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 GPATCH4Q5T3I0 446 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 C9orf139Q6ZV77 190 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 GSTA5Q7RTV2 222 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 CPLX4Q7Z7G2 160 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 CERS3Q8IU89 383 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 BEST3Q8N1M1 668 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 KBTBD3Q8NAB2 608 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 CSNK2A3Q8NEV1 391 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 BBS10Q8TAM1 723 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 LNX1Q8TBB1 728 aaPredicted RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 ETNPPLQ8TBG4 499 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 MAGEC3Q8TD91 643 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 DNASE2BQ8WZ79 361 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 SMARCE1Q969G3 411 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 FAM149B1Q96BN6 582 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 RRNAD1Q96FB5 475 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 TTC14Q96N46 770 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 MAP7D2Q96T17 732 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 MTERF1Q99551 399 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCGF1Q9BSM1 259 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 FBRSL1Q9HCM7 1045 aaKnown RBP3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM30AQ9NV96 361 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 IRAK4Q9NWZ3 460 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 PADI1Q9ULC6 663 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 PADI3Q9ULW8 664 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF711Q9Y462 761 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 LOXL2Q9Y4K0 774 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 PIAS3Q9Y6X2 628 aa3.16□□□□□ -1.9
RNU4-48P-201ENST00000365559 FAM237BA0A1B0GVD1 139 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 C1orf226A1L170 272 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 XPNPEP2O43895 674 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 KRT36O76013 467 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 CAMTA2O94983 1202 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 MLYCDO95822 493 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 CDH1P12830 882 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 MYOD1P15172 320 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 CLCN3P51790 818 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 PDE1BQ01064 536 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 ARL16Q0P5N6 197 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 CSTF3Q12996 717 aaKnown RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZRSR1Q15695 479 aaKnown RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 SMIM29Q86T20 159 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 EXOC3L1Q86VI1 746 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 MUC20Q8N307 709 aaPredicted RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 SRBD1Q8N5C6 995 aaKnown RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 ACVR1CQ8NER5 493 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR5R1Q8NH85 324 aa3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 TDRD7Q8NHU6 1098 aaKnown RBP3.15□□□□□ -1.91
RNU4-48P-201ENST00000365559 APBB2Q92870 758 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms