RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ATP6V1G2O95670 118 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 COX4I1P13073 169 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 WASHC2DQ5SRD0 308 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 FAAH2Q6GMR7 532 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CHSY3Q70JA7 882 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 CLHC1Q8NHS4 586 aa18.55■□□□□ 0.56
CLIP2-202ENST00000361545 MTF2Q9Y483 593 aaPredicted RBP18.55■□□□□ 0.56
CLIP2-202ENST00000361545 LRRC72A6NJI9 287 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 RPL3P39023 403 aaKnown RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 RPS24P62847 133 aaKnown RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF549Q6P9A3 640 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 RASGEF1CQ8N431 466 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 WDR36Q8NI36 951 aaKnown RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 ADI1Q9BV57 179 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 PNPOQ9NVS9 261 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 YIPF1Q9Y548 306 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 CCDC189A1A4V9 331 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 HIST1H2ABP04908 130 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 NDST2P52849 883 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 DLG2Q15700 870 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 DGKKQ5KSL6 1271 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 HIST3H2AQ7L7L0 130 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 HIST1H2ACQ93077 130 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 FANCEQ9HB96 536 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 CLPTM1O96005 669 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 SLC34A1Q06495 639 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 SNX30Q5VWJ9 437 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 TPGS2Q68CL5 300 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 TTLL2Q9BWV7 592 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 KLHL1Q9NR64 748 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 PAIP2BQ9ULR5 123 aaKnown RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 APLP1P51693 650 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 CA9Q16790 459 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF792Q3KQV3 632 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 SYPL2Q5VXT5 272 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 GPN3Q9UHW5 284 aaPredicted RBP18.54■□□□□ 0.56
CLIP2-202ENST00000361545 ENOPH1Q9UHY7 261 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 VPS4AQ9UN37 437 aa18.54■□□□□ 0.56
CLIP2-202ENST00000361545 A0A1W2PQ67 120 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 SNX3O60493 162 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 AP1S1P61966 158 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 ILF3Q12906 894 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 NAE1Q13564 534 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 CUZD1Q86UP6 607 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 MREGQ8N565 214 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 ANGPT4Q9Y264 503 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 ABHD14A-ACY1A0A1B0GW23 586 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 IDH2P48735 452 aaKnown RBP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 CLK3P49761 638 aaKnown RBP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 PSME3P61289 254 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 OR52E6Q96RD3 313 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 AP3M1Q9Y2T2 418 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 UNCXA6NJT0 531 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 FAM58BPP0C7Q3 252 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 TRABD2AQ86V40 505 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 KIAA2013Q8IYS2 634 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 PPCDCQ96CD2 204 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 TSSK3Q96PN8 268 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 MCMBPQ9BTE3 642 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 TRAF6Q9Y4K3 522 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 LRRC14BA6NHZ5 514 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 RFXANKO14593 260 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 BIRC5O15392 142 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 ANKRD22Q5VYY1 191 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 CHST15Q7LFX5 561 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 DCBLD1Q8N8Z6 715 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 NXNL1Q96CM4 212 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 RNFT2Q96EX2 444 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 SALL4Q9UJQ4 1053 aa18.53■□□□□ 0.56
CLIP2-202ENST00000361545 MRPS33Q9Y291 106 aaKnown RBP18.53■□□□□ 0.56
CLIP2-202ENST00000361545 GTPBP1O00178 669 aaKnown RBP18.52■□□□□ 0.56
CLIP2-202ENST00000361545 KRT75O95678 551 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ALAS2P22557 587 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 HK2P52789 917 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 IL10RBQ08334 325 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ZFP1Q6P2D0 407 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 NKD2Q969F2 451 aaPredicted RBP18.52■□□□□ 0.56
CLIP2-202ENST00000361545 AIF1LQ9BQI0 150 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 EPB41L4BQ9H329 900 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 CSKP41240 450 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 FSTL1Q12841 308 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 TXNDC8Q6A555 127 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 R3HCC1LQ7Z5L2 792 aaKnown RBP18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ZNF605Q86T29 641 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 C9orf16Q9BUW7 83 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 SDCBP2Q9H190 292 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 FKBPLQ9UIM3 349 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 TCAF1Q9Y4C2 921 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 MYL12AP19105 171 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 PPM1JQ5JR12 505 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ESRP1Q6NXG1 681 aaKnown RBP18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ISLR2Q6UXK2 745 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 CERS6Q6ZMG9 384 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 ADHFE1Q8IWW8 467 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms