RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ARSKQ6UWY0 536 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 METTL3Q86U44 580 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 CHERPQ8IWX8 916 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 SCUBE3Q8IX30 993 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 SGK3Q96BR1 496 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 MTERF3Q96E29 417 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 FIZ1Q96SL8 496 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 CDK5RAP1Q96SZ6 601 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 LPIN3Q9BQK8 851 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 CATSPERBQ9H7T0 1116 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 MYRFQ9Y2G1 1151 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 OR4Q2P0C623 313 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 HDCP19113 662 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 KCNJ5P48544 419 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 MGAT5Q09328 741 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 TWF1Q12792 350 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 DDR2Q16832 855 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 FUT10Q6P4F1 479 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 OR8H3Q8N146 312 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 KRT78Q8N1N4 520 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ATPAF2Q8N5M1 289 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 TEX47Q8TBZ9 253 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 DLG3Q92796 817 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ILKAPQ9H0C8 392 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 EPB41L4BQ9H329 900 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 SLCO1B3Q9NPD5 702 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ARMC1Q9NVT9 282 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ADPRHL2Q9NX46 363 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 TRAFD1O14545 582 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 TSPAN3O60637 253 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 IDUAP35475 653 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 CDC16Q13042 620 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 FASTKD1Q53R41 847 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 TNFAIP8L3Q5GJ75 292 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 SNX20Q7Z614 316 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 LINC00523Q86TU6 105 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 EMC1Q8N766 993 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ZNF670Q9BS34 389 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 C16orf70Q9BSU1 422 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PDCD10Q9BUL8 212 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 A0A1W2PPM1 405 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PSMD12O00232 456 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 RALBP11234 206 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ADSSP30520 456 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 GABRB2P47870 512 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 WDR4P57081 412 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 MCCD1P59942 119 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 KRR1Q13601 381 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ANGPT1Q15389 498 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 C9orf57Q5W0N0 161 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ASRGL1Q7L266 308 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 AMIGO1Q86WK6 493 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 IFNEQ86WN2 208 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 ERI1Q8IV48 349 aaKnown RBP9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.824e-6■■■■■ 36.3
SIN3A-201ENST00000360439 CADM2Q8N3J6 435 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 CPT1BQ92523 772 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 PWWP2AQ96N64 755 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 LRRC40Q9H9A6 602 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 FANCEQ9HB96 536 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 STOML2Q9UJZ1 356 aa9.93□□□□□ -0.82
SIN3A-201ENST00000360439 MYH7BA7E2Y1 1941 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 E9PBE3 544 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 TFECO14948 347 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 ECDO95905 644 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 F9P00740 461 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 IL12AP29459 219 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 PRDX6P30041 224 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 CRHR1P34998 444 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 ETV5P41161 510 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 ZNF135P52742 658 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 BNIP3Q12983 259 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 NOMO1Q15155 1222 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 POTEHQ6S545 545 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 GALNT13Q8IUC8 556 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 ATAD1Q8NBU5 361 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 MCUQ8NE86 351 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 FAM172AQ8WUF8 416 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 GAB3Q8WWW8 586 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 RXFP2Q8WXD0 754 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 HGH1Q9BTY7 390 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 MKRN2Q9H000 416 aaKnown RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 CDH9Q9ULB4 789 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 IFT52Q9Y366 437 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 ST14Q9Y5Y6 855 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 MRPL42Q9Y6G3 142 aaKnown RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 TCRBV9S1A1TA0A576 114 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 PSKH1P11801 424 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 BNC2Q6ZN30 1099 aaPredicted RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 B3GALNT2Q8NCR0 500 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 PPHLN1Q8NEY8 458 aaKnown RBP9.92□□□□□ -0.82
SIN3A-201ENST00000360439 LURAP1Q96LR2 239 aa9.92□□□□□ -0.82
SIN3A-201ENST00000360439 SMYD2Q9NRG4 433 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms