RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 MKLN1Q9UL63 735 aa13.2□□□□□ -0.3
SRGAP3-201ENST00000360413 ENDOD1O94919 500 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 RAPSNQ13702 412 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 KCTD8Q6ZWB6 473 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 MREGQ8N565 214 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CRB1P82279 1406 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CYP2B6P20813 491 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 GPAT3Q53EU6 434 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 ALG5Q9Y673 324 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 PDLIM1O00151 329 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CACNB4O00305 520 aaPredicted RBP13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 EPHA3P29320 983 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 ZSCAN5BA6NJL1 495 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC28A2O43868 658 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 GABBR2O75899 941 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 FNDC11Q9BVV2 318 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 ZFP14Q9HCL3 533 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 TMED5Q9Y3A6 229 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CHD1O14646 1710 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 DNTTP04053 509 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CYP11B2P19099 503 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 UROC1Q96N76 676 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 IDO1P14902 403 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 ZBTB6Q15916 424 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 NR2C1P13056 603 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 FMO4P31512 558 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 MCOLN2Q8IZK6 566 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 PLA2G12BQ9BX93 195 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
SRGAP3-201ENST00000360413 TOR1BO14657 336 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 HCAR2Q8TDS4 363 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 FCRL4Q96PJ5 515 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CDH19Q9H159 772 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ARL8BQ9NVJ2 186 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 M0QX08 132 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC30A4O14863 429 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PEX11AO75192 247 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ADH1CP00326 375 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 IGFBP5P24593 272 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 DNAJA4Q8WW22 397 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ZSCAN5AQ9BUG6 496 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ABCG4Q9H172 646 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SPAG17Q6Q759 2223 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 IQGAP3Q86VI3 1631 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 KANTRA0A1W2PQU2 76 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PPP3R1P63098 170 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 LIPMQ5VYY2 423 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SELENOMQ8WWX9 145 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 DNAJA2O60884 412 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CABYRO75952 493 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 GSTT2BP0CG30 244 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CCNFP41002 786 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 GPR135Q8IZ08 494 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 MPP5Q8N3R9 675 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SMPD3Q9NY59 655 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 GLI2P10070 1586 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CHADO15335 359 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A9O60656 530 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PAEPP09466 180 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A6P19224 532 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A1P22309 533 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A4P22310 534 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A3P35503 534 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 FAM76BQ5HYJ3 339 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms