RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FEM1CQ96JP0 617 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 KCNK1O00180 336 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CLDN11O75508 207 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ALDH4A1P30038 563 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CACNG1Q06432 222 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 TSC22D1Q15714 1073 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 GALNT13Q8IUC8 556 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 DHRS12A0PJE2 317 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 MT-CO1P00395 513 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 EIPR1Q53HC9 387 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SULT1C3Q6IMI6 304 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CES3Q6UWW8 571 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 TSHZ1Q6ZSZ6 1077 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ARHGAP22Q7Z5H3 698 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 GPR180Q86V85 440 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ZSWIM2Q8NEG5 633 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 DGCR14Q96DF8 476 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 TTPALQ9BTX7 342 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 FPGTO14772 594 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ATP5A1P25705 553 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 SCNN1GP51170 649 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ZNF132P52740 706 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 NAA30Q147X3 362 aaPredicted RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 ARHGAP36Q6ZRI8 547 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 PIK3R3Q92569 461 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ACO2Q99798 780 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SRSF11Q05519 484 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 ZHX1-C8orf76Q96EF9 292 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 IGFBP4P22692 258 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SLC41A1Q8IVJ1 513 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 TATDN2Q93075 761 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 DOCK10Q96BY6 2186 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CRTC3Q6UUV7 619 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 FBXO30Q8TB52 745 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CPNE2Q96FN4 548 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 RBM4Q9BWF3 364 aaKnown RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 PLEKHA1Q9HB21 404 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 UPB1Q9UBR1 384 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 NR2C1P13056 603 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 OR2AJ1Q8NGZ0 328 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 TSEN15Q8WW01 171 aaKnown RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 GDF3Q9NR23 364 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 RAPGEFL1Q9UHV5 662 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 PCDHGB7Q9Y5F8 929 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CEMIPQ8WUJ3 1361 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CAPN14A8MX76 684 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ITPKBP27987 946 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ZFP14Q9HCL3 533 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SEC14L3Q9UDX4 400 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CHKBQ9Y259 395 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 DHFRP00374 187 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 PRKCIP41743 596 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 GTF2BQ00403 316 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.66□□□□□ -0.868e-7■■■■■ 33
CUX1-203ENST00000360264 STRADAQ7RTN6 431 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SUN3Q8TAQ9 357 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 HCAR2Q8TDS4 363 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 MAFO75444 373 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 SLC22A17Q8WUG5 538 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 RBM18Q96H35 190 aaKnown RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 TDRD1Q9BXT4 1180 aaKnown RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 FADS2P1A8MWK0 482 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ISM1B1AKI9 464 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CASRP41180 1078 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 ARF5P84085 180 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 GPR158Q5T848 1215 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SYVN1Q86TM6 617 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ZNF483Q8TF39 744 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 DNASE1L2Q92874 299 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 IL12RB2Q99665 862 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 TRPV5Q9NQA5 729 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 COL1A2P08123 1366 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 H0Y858 1186 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 AGR2O95994 175 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ALDH3A2P51648 485 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 NRG3P56975 720 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 PCDH12Q9NPG4 1184 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 MCM8Q9UJA3 840 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 PTPRAP18433 802 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 MASP1P48740 699 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 UNC5AQ6ZN44 842 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 CATSPERGQ6ZRH7 1159 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SPATA19Q7Z5L4 167 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 SLC9A6Q92581 669 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 MGME1Q9BQP7 344 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ADCYAP1R1P41586 468 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 MATKP42679 507 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 AVPR1BP47901 424 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 FAM81AQ8TBF8 368 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms