RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NT5C1AQ9BXI3 368 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 HOXD1Q9GZZ0 328 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 FAM49BQ9NUQ9 324 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 ZNF229Q9UJW7 825 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 MYO18AQ92614 2054 aaKnown RBP14.9□□□□□ -0.02
UBAP1-202ENST00000359544 A0A0J9YYE9 177 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 M0QX08 132 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 PSMD11O00231 422 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 NR5A2O00482 541 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 CHEK2O96017 543 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 ADAM17P78536 824 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 GALNT1Q10472 559 aaPredicted RBP14.9□□□□□ -0.02
UBAP1-202ENST00000359544 R3HCC1LQ7Z5L2 792 aaKnown RBP14.9□□□□□ -0.02
UBAP1-202ENST00000359544 PIGZQ86VD9 579 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 SLC22A16Q86VW1 577 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 SCML4Q8N228 414 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 MFSD4AQ8N468 514 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 LILRB4Q8NHJ6 448 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 CAPSLQ8WWF8 208 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 MAGEB5Q9BZ81 275 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 IL1RL2Q9HB29 575 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 SNX5Q9Y5X3 404 aa14.9□□□□□ -0.02
UBAP1-202ENST00000359544 ILVBLA1L0T0 632 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 SPATA31C2B4DYI2 1134 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 AP3B1O00203 1094 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 SLC22A1O15245 554 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 GPX3P22352 226 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 SHMT2P34897 504 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 ATXN1P54253 815 aaKnown RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 ECT2LQ008S8 904 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 KIF19Q2TAC6 998 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 CERCAMQ5T4B2 595 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 LARP4Q71RC2 724 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 VASH1Q7L8A9 365 aaPredicted RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 C8orf59Q8N0T1 100 aaPredicted RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 HDAC11Q96DB2 347 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 ZNF486Q96H40 463 aaPredicted RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 CPB2Q96IY4 423 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 PAWRQ96IZ0 340 aaKnown RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 YME1L1Q96TA2 773 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 C2orf40Q9H1Z8 148 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 PRDM12Q9H4Q4 367 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 CHRAC1Q9NRG0 131 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 NRBP2Q9NSY0 501 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 CMTM6Q9NX76 183 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 ANK1P16157 1881 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 ASNA1O43681 348 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 NFICP08651 508 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 CXCL8P10145 99 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 HTR1BP28222 390 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 MNX1P50219 401 aaPredicted RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 TOP3AQ13472 1001 aaPredicted RBP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 LACC1Q8IV20 430 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 OR7A2PQ8NGA2 310 aa14.89□□□□□ -0.03
UBAP1-202ENST00000359544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBAP1-202ENST00000359544 TCRBV5S2A0A599 114 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 MYADML2A6NDP7 307 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 CENPBD1B2RD01 187 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 M0R3G1 203 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 AURKAO14965 403 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 SEPT4O43236 478 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ARSAP15289 507 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ITIH1P19827 911 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ALDH3A2P51648 485 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 IFITM2Q01629 132 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 CTF1Q16619 201 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 TMEM132AQ24JP5 1023 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 UBXN10Q96LJ8 280 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 DGCR6LQ9BY27 220 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 TRIM54Q9BYV2 358 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 FAM95CA0A1B0GW59 222 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ISPDA4D126 451 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-202ENST00000359544 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
UBAP1-202ENST00000359544 THRBP10828 461 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 NR4A1P22736 598 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 DNAJB2P25686 324 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 NMBRP28336 390 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 TARBP2Q15633 366 aaKnown RBP14.88□□□□□ -0.03
UBAP1-202ENST00000359544 COQ5Q5HYK3 327 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ATF7IP2Q5U623 682 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 IER5Q5VY09 327 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 SLX4IPQ5VYV7 408 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 TTC23Q5W5X9 447 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 STRADAQ7RTN6 431 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 ADCK1Q86TW2 530 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 PTRH1Q86Y79 214 aaKnown RBP14.88□□□□□ -0.03
UBAP1-202ENST00000359544 PYROXD2Q8N2H3 581 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 BEST2Q8NFU1 509 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 LRCH3Q96II8 777 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 HPDLQ96IR7 371 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 RDH12Q96NR8 316 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 CRISPLD2Q9H0B8 497 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 SPC25Q9HBM1 224 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■■□□□ 11.4
UBAP1-202ENST00000359544 KLQ9UEF7 1012 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 FZD10Q9ULW2 581 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms