RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CNSTQ6PJW8 725 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 PARM1Q6UWI2 310 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 VITQ6UXI7 678 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 CMC1Q7Z7K0 106 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
CCDC197-201ENST00000359253 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 CCDC63Q8NA47 563 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 EDAQ92838 391 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 ATXN7L3BQ96GX2 97 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 NECAB3Q96P71 396 aaPredicted RBP13.47□□□□□ -0.25
CCDC197-201ENST00000359253 OMDQ99983 421 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 CIPCQ9C0C6 399 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 FAM107BQ9H098 131 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 CDH19Q9H159 772 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 CCDC68Q9H2F9 335 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 TRPV5Q9NQA5 729 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 MYLKQ15746 1914 aa13.47□□□□□ -0.25
CCDC197-201ENST00000359253 ATXN2Q99700 1313 aaKnown RBP13.46□□□□□ -0.25
CCDC197-201ENST00000359253 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 RGSL1A5PLK6 1076 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 AURKAO14965 403 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 DCXO43602 365 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 RBP1P09455 135 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 SLC35E2BP0CK96 405 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 TROVE2P10155 538 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC197-201ENST00000359253 CPA3P15088 417 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 ARSAP15289 507 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 HNF1BP35680 557 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 TAS2R39P59534 338 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 PPARDQ03181 441 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 CDKN3Q16667 212 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 GAB4Q2WGN9 574 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 PPM1JQ5JR12 505 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 Q6ZVU0 165 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 LYSMD3Q7Z3D4 306 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 SLC41A1Q8IVJ1 513 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 FGF14Q92915 247 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 C7orf26Q96N11 449 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 AARSD1Q9BTE6 412 aaKnown RBP13.46□□□□□ -0.25
CCDC197-201ENST00000359253 TSSK1BQ9BXA7 367 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 SUDS3Q9H7L9 328 aaPredicted RBP13.46□□□□□ -0.25
CCDC197-201ENST00000359253 HPS4Q9NQG7 708 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 POLR3BQ9NW08 1133 aaPredicted RBP13.46□□□□□ -0.25
CCDC197-201ENST00000359253 TMEM216Q9P0N5 145 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 SUN2Q9UH99 717 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
CCDC197-201ENST00000359253 KIF26AQ9ULI4 1882 aaPredicted RBP13.46□□□□□ -0.26
CCDC197-201ENST00000359253 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 DOCK8Q8NF50 2099 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 C1orf232A0A0U1RR37 186 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 H3BMM5 538 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ESR1P03372 595 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PRNPP04156 253 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PYGLP06737 847 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SRFP11831 508 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ITGALP20701 1170 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 FDXRP22570 491 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SPAM1P38567 509 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ZXDAP98168 799 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 XIAPP98170 497 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PFKPQ01813 784 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 STX3Q13277 289 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PEX6Q13608 980 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ACAP2Q15057 778 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SMAD1Q15797 465 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PTPRNQ16849 979 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ZNF805Q5CZA5 627 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 UGT3A1Q6NUS8 523 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SPATA21Q7Z572 469 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SNX20Q7Z614 316 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PPP1R14CQ8TAE6 165 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 GRIN3AQ8TCU5 1115 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 LPGAT1Q92604 370 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 CCDC126Q96EE4 140 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 UBXN10Q96LJ8 280 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 PLEKHG4BQ96PX9 1271 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 MRPL57Q9BQC6 102 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms