RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SRRM3A6NNA2 597 aaPredicted RBP18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 GOLGA8RI6L899 631 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 SPAG7O75391 227 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 HAUS5O94927 633 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 CYP2A6P11509 494 aaPredicted RBP18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 LSP1P33241 339 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 LEPRP48357 1165 aaKnown RBP18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 STC1P52823 247 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 CCINQ13939 588 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 TTC19Q6DKK2 380 aaPredicted RBP18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 CNSTQ6PJW8 725 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 DPPA4Q7L190 304 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 OTUD6BQ8N6M0 293 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 DENND1AQ8TEH3 1009 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 ISL2Q96A47 359 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 PBXIP1Q96AQ6 731 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 RHOJQ9H4E5 214 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 FAM96AQ9H5X1 160 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 CD248Q9HCU0 757 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 IL26Q9NPH9 171 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 MKS1Q9NXB0 559 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 ITM2BQ9Y287 266 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 PLXNA2O75051 1894 aa18.1■□□□□ 0.49
SMARCD3-202ENST00000356800 A0A1W2PQF6 199 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 C1QTNF3-AMACRE9PGA6 284 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 GPR39O43194 453 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ALDOAP04075 364 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 PYGBP11216 843 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 COL9A1P20849 921 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 XPAP23025 273 aaPredicted RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CCNFP41002 786 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 COPAP53621 1224 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 MRPS21P82921 87 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 SATB1Q01826 763 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 MLF2Q15773 248 aaPredicted RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 MRNIPQ6NTE8 343 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 PSAPL1Q6NUJ1 521 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 GALNT7Q86SF2 657 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CBARPQ8N350 705 aaPredicted RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 DCLK2Q8N568 766 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 GPR26Q8NDV2 337 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ACMSDQ8TDX5 336 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 GPR22Q99680 433 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CCDC134Q9H6E4 229 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 AREL1O15033 823 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 TM9SF1O15321 606 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 SYNCRIPO60506 623 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ZWINTO95229 277 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ADRB3P13945 408 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ZNF30P17039 623 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 OGNP20774 298 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CA5AP35218 305 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 RPA3P35244 121 aaPredicted RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CD151P48509 253 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CST6Q15828 149 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 TYSND1Q2T9J0 566 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 FASTKD1Q53R41 847 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 FBXL19Q6PCT2 694 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 FAM151BQ6UXP7 276 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ERN2Q76MJ5 926 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 HSD11B1LQ7Z5J1 315 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 CACUL1Q86Y37 369 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 ANKRD42Q8N9B4 389 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 PPP1R16AQ96I34 528 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 APOPT1Q96IL0 206 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 HDAC8Q9BY41 377 aa18.09■□□□□ 0.49
SMARCD3-202ENST00000356800 GOLGA8CPA6NN73 597 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 TPP1O14773 563 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 MID1O15344 667 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 DRD3P35462 400 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 P2RY2P41231 377 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 SPINT3P49223 89 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 CNTN1Q12860 1018 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 ARHGEF7Q14155 803 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 ZRANB3Q5FWF4 1079 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 FAM46CQ5VWP2 391 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 SDE2Q6IQ49 451 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 ERAP2Q6P179 960 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 AADATQ8N5Z0 425 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 OR2T3Q8NH03 318 aa18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 MKRN2Q9H000 416 aaKnown RBP18.08■□□□□ 0.48
SMARCD3-202ENST00000356800 SRP72O76094 671 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 PRAMEF1O95521 474 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 HOXB2P14652 356 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 GM2AP17900 193 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 NFKBIAP25963 317 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 SPAM1P38567 509 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 MAGEA12P43365 314 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 POLD2P49005 469 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 NEK3P51956 506 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 RPS14P62263 151 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 CHRNA6Q15825 494 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 FBXO43Q4G163 708 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 PIP5KL1Q5T9C9 394 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 LIPIQ6XZB0 460 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 TRMT11Q7Z4G4 463 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 CMC1Q7Z7K0 106 aa18.07■□□□□ 0.48
SMARCD3-202ENST00000356800 ZNF687Q8N1G0 1237 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms