RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 GTF2E2P29084 291 aaKnown RBP14.87□□□□□ -0.03
COL17A1-201ENST00000353479 NRIP1P48552 1158 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 SLC25A3Q00325 362 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 INCA1Q0VD86 236 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 CAPN13Q6MZZ7 669 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-201ENST00000353479 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 PROX1Q92786 737 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 HAPLN1P10915 354 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-201ENST00000353479 IDSP22304 550 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 CRHR1P34998 444 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 CHRNA4P43681 627 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 AP5B1Q2VPB7 878 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 NCBP2-AS2Q69YL0 99 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 DRICH1Q6PGQ1 229 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-201ENST00000353479 ZNF461Q8TAF7 563 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 IGSF9Q9P2J2 1179 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 PLLPQ9Y342 182 aa14.87□□□□□ -0.03
COL17A1-201ENST00000353479 SOD2P04179 222 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 COX4I1P13073 169 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 FECHP22830 423 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GDI1P31150 447 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 DEPDC1Q5TB30 811 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GALNT13Q8IUC8 556 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 EID3Q8N140 333 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 OR6Y1Q8NGX8 325 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 DNAJB14Q8TBM8 379 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 BRSK1Q8TDC3 778 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 INSL5Q9Y5Q6 135 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 HS3ST4Q9Y661 456 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 LDLRP01130 860 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GUCA1AP43080 201 aaPredicted RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 RUNX1T1Q06455 604 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 C2orf27AQ580R0 203 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 FOXR1Q6PIV2 292 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 TRIM69Q86WT6 500 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 CFAP206Q8IYR0 622 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 CAMKK1Q8N5S9 505 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 CD101Q93033 1021 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 CDH19Q9H159 772 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 TTC24A2A3L6 582 aaPredicted RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 FOXO6A8MYZ6 492 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 M0R3G1 203 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 SCAMP1O15126 338 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 SLC31A1O15431 190 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 ERAL1O75616 437 aaKnown RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 METTL18O95568 372 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 PEX6Q13608 980 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 UPP1Q16831 310 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 ALFQ53S48 1182 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 WASHC2DQ5SRD0 308 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 AGMOQ6ZNB7 445 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 C17orf64Q86WR6 236 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 IQCKQ8N0W5 287 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 LEMD2Q8NC56 503 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 OSBPL2Q9H1P3 480 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GTF2A1LQ9UNN4 478 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 KLHL20Q9Y2M5 609 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 TRAF6Q9Y4K3 522 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GALTP07902 379 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 GSSP48637 474 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 UBXN2BQ14CS0 331 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 SMG8Q8ND04 991 aaKnown RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 POF1BQ8WVV4 589 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 AARSD1Q9BTE6 412 aaKnown RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 TMEM216Q9P0N5 145 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 LEF1Q9UJU2 399 aaPredicted RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 SORCS3Q9UPU3 1222 aa14.86□□□□□ -0.03
COL17A1-201ENST00000353479 MRPS17Q9Y2R5 130 aaKnown RBP14.86□□□□□ -0.03
COL17A1-201ENST00000353479 LRRC72A6NJI9 287 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 IQCF5A8MTL0 148 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 OR10H2O60403 315 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 SNUPNO95149 360 aaKnown RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 LIMK2P53671 638 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 FAM182AQ5T1J6 154 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 ZFP28Q8NHY6 868 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 FBXO30Q8TB52 745 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 IGSF21Q96ID5 467 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 POLR3BQ9NW08 1133 aaPredicted RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 ADAMTS5Q9UNA0 930 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 ARL5AQ9Y689 179 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 FSBPO95073 299 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 ATP6V1G2O95670 118 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 PRKCGP05129 697 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 BLVRAP53004 296 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 CYP4F2P78329 520 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 ECT2LQ008S8 904 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 PPIDQ08752 370 aaKnown RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 SF1Q15637 639 aaKnown RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 CARD16Q5EG05 197 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 PARGQ86W56 976 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 CMASQ8NFW8 434 aaPredicted RBP14.85□□□□□ -0.03
COL17A1-201ENST00000353479 AZIN2Q96A70 460 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 SMOC2Q9H3U7 446 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 SGK2Q9HBY8 427 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 USE1Q9NZ43 259 aa14.85□□□□□ -0.03
COL17A1-201ENST00000353479 PACSIN3Q9UKS6 424 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms