RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GRIA1P42261 906 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ETV4P43268 484 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ALDH1A3P47895 512 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 PGFP49763 221 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 NDST2P52849 883 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 TBX4P57082 545 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MGAT5Q09328 741 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 USP4Q13107 963 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MTM1Q13496 603 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SLC1A5Q15758 541 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ANO4Q32M45 955 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 HSF5Q4G112 596 aaPredicted RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 EOGTQ5NDL2 527 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 PIK3R6Q5UE93 754 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 HHATQ5VTY9 493 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SNX30Q5VWJ9 437 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ZNF787Q6DD87 383 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 NAPEPLDQ6IQ20 393 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 RWDD4Q6NW29 188 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SPATA21Q7Z572 469 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 TMEM135Q86UB9 458 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 MIB1Q86YT6 1006 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 UMODL1-AS1Q8N2C9 162 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 OTUD6BQ8N6M0 293 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 PPM1NQ8N819 430 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 PDZD8Q8NEN9 1154 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 LRRC8CQ8TDW0 803 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 CCT6BQ92526 530 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ATP2A3Q93084 1043 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ISL2Q96A47 359 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 OXNAD1Q96HP4 312 aaPredicted RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 SERAC1Q96JX3 654 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 FCRL5Q96RD9 977 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ELAC2Q9BQ52 826 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 MLPHQ9BV36 600 aaPredicted RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 FGFR1OP2Q9NVK5 253 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 TMEM248Q9NWD8 314 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SYBUQ9NX95 663 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SFMBT1Q9UHJ3 866 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ARL2BPQ9Y2Y0 163 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 AAR2Q9Y312 384 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 HBS1LQ9Y450 684 aaKnown RBP8.27□□□□□ -1.09
CD44-205ENST00000352818 PCDHB1Q9Y5F3 818 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
CD44-205ENST00000352818 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CCT8L1PA6NM43 557 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 DRGXA6NNA5 263 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 TRIM49D1C9J1S8 452 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 KLF11O14901 512 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 PCDHGA12O60330 932 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 MAFKO60675 156 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 RFPL1O75677 317 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 RFPL3O75679 317 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 ANXA9O76027 345 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 RNF224P0DH78 156 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CCNB1P14635 433 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 HMGA1P17096 107 aaKnown RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 CDC25CP30307 473 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 AVPR1AP37288 418 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 GPR15P49685 360 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 TUBP50607 506 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 GEMP55040 296 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 SESN2P58004 480 aaPredicted RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 USP46P62068 366 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 ZXDBP98169 803 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CDH17Q12864 832 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 IFT88Q13099 833 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 DDR2Q16832 855 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 C5orf22Q49AR2 442 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 MS4A13Q5J8X5 152 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 WDR45BQ5MNZ6 344 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CGB2Q6NT52 195 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 TRMT10BQ6PF06 316 aaKnown RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 KLHDC10Q6PID8 442 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 LVRNQ6Q4G3 990 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 IL27RAQ6UWB1 636 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 TRIM42Q8IWZ5 723 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CTAGE3PQ8IX95 158 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 DCBLD1Q8N8Z6 715 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 NETO2Q8NC67 525 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 RAB3IL1Q8TBN0 382 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 ZNF398Q8TD17 642 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 KCNE4Q8WWG9 221 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 CELF6Q96J87 481 aaKnown RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 ZNF578Q96N58 590 aaPredicted RBP8.26□□□□□ -1.09
CD44-205ENST00000352818 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 ZYG11BQ9C0D3 744 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 SLC39A8Q9C0K1 460 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 IL22Q9GZX6 179 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 SIK2Q9H0K1 926 aa8.26□□□□□ -1.09
CD44-205ENST00000352818 MRM3Q9HC36 420 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms