RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CCDC189A1A4V9 331 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CAPN8A6NHC0 703 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SLCO1B7G3V0H7 640 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 GAPDHSO14556 408 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 HDAC3O15379 428 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 STX7O15400 261 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 XYLBO75191 536 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 WFS1O76024 890 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 IPO13O94829 963 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PIGNO95427 931 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 IGSF6O95976 241 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TRBC1P01850 177 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PRSS56P0CW18 603 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PABPC1P11940 636 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SRCP12931 536 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 EPCAMP16422 314 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TFEBP19484 476 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 KCNA5P22460 613 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SP100P23497 879 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MPSTP25325 297 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PMLP29590 882 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CTSOP43234 321 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CCR10P46092 362 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 VASPP50552 380 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 RPL14P50914 215 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PTPN5P54829 565 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CACNG1Q06432 222 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 BCL2L1Q07817 233 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 GALNT1Q10472 559 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PTPRRQ15256 657 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 FUT11Q495W5 492 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 KLC3Q6P597 504 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TRIM67Q6ZTA4 783 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SPRED2Q7Z698 418 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PIM3Q86V86 326 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TMEM25Q86YD3 366 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CAMK1DQ8IU85 385 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SLC22A9Q8IVM8 553 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PARP9Q8IXQ6 854 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PIANPQ8IYJ0 282 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 C7orf61Q8IZ16 206 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CBARPQ8N350 705 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF557Q8N988 423 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 OR2AP1Q8NGE2 309 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 RHEBL1Q8TAI7 183 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MAPK15Q8TD08 544 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MAGEC3Q8TD91 643 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 IRF7Q92985 503 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PTERQ96BW5 349 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 OTUB2Q96DC9 234 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 L3HYPDHQ96EM0 354 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MAELQ96JY0 434 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SAMD11Q96NU1 681 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CCDC28BQ9BUN5 200 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TBC1D10AQ9BXI6 508 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CPEB1Q9BZB8 566 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TM6SF2Q9BZW4 377 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 CEP44Q9C0F1 390 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 DERL2Q9GZP9 239 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 P2RY12Q9H244 342 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MTIF3Q9H2K0 278 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TFB2MQ9H5Q4 396 aaKnown RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 COG4Q9H9E3 785 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PLK2Q9NYY3 685 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 ARMCX1Q9P291 453 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 VTI1BQ9UEU0 232 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 EVLQ9UI08 416 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 TAGLN3Q9UI15 199 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 MTF2Q9Y483 593 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-203ENST00000350034 PCDHB9Q9Y5E1 797 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 COMMD10Q9Y6G5 202 aa6.9□□□□□ -1.3
TRIM55-203ENST00000350034 SETXQ7Z333 2677 aaKnown RBP6.9□□□□□ -1.31
TRIM55-203ENST00000350034 ATRXP46100 2492 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 TRBV5-4A0A0C4DH59 114 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 NEMP2A6NFY4 417 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 AGAP14A8MT82 685 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PRR5-ARHGAP8B1AHC4 643 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 WASH3PC4AMC7 463 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 F8W8V4 182 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 H3BMM5 538 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF197O14709 1029 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 GSC2O15499 205 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZBTB14O43829 449 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 KLK8O60259 260 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 NDUFS3O75489 264 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ATP6V1G2O95670 118 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 TSPAN12O95859 305 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MTHFD2P13995 350 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PKMP14618 531 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 IMPDH1P20839 514 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 RPS3P23396 243 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PRDX6P30041 224 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ADSLP30566 484 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MC4RP32245 332 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PTGER3P43115 390 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms