RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SERPINB9P50453 376 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 SRP54P61011 504 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 CRADDP78560 199 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 GHRHRQ02643 423 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PRPSAP1Q14558 356 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 DARS2Q6PI48 645 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 CBWD2Q8IUF1 395 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PHC2Q8IXK0 858 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 ZBTB44Q8NCP5 570 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 HMGCLL1Q8TB92 370 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 RHOBTB2Q9BYZ6 727 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 TRIM15Q9C019 465 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 FBXO28Q9NVF7 368 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PDE10AQ9Y233 779 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 OR6C70A6NIJ9 312 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PLD2O14939 933 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 CHMP2AO43633 222 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 SERPINI2O75830 405 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PIGNO95427 931 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PCMT1P22061 227 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 TYK2P29597 1187 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 GRM7Q14831 915 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 CTU2Q2VPK5 515 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 FAM219BQ5XKK7 198 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 THAP5Q7Z6K1 395 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 P2RY8Q86VZ1 359 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 CDC26Q8NHZ8 85 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 SLC22A8Q8TCC7 542 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 TESCQ96BS2 214 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 LPIN3Q9BQK8 851 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 HDHD5Q9BXW7 423 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 RSAD1Q9HA92 442 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 MRPL40Q9NQ50 206 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 NECTIN3Q9NQS3 549 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 DIABLOQ9NR28 239 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PIH1D1Q9NWS0 290 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 HSPBP1Q9NZL4 362 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 ENOPH1Q9UHY7 261 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 MRPS7Q9Y2R9 242 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 K7ENM7 598 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 BET1O15155 118 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 VNN1O95497 513 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 BMP1P13497 986 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 MSH3P20585 1137 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 RPL14P50914 215 aaKnown RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 YBX1P67809 324 aaKnown RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 EMX1Q04741 257 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CBX2Q14781 532 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 AGKQ53H12 422 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 PYCR3Q53H96 274 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 ARL13AQ5H913 290 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 SAMD4BQ5PRF9 694 aaKnown RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 DACT2Q5SW24 774 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 GRTP1Q5TC63 336 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF517Q6ZMY9 492 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 EFL1Q7Z2Z2 1120 aaKnown RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 RFX6Q8HWS3 928 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CDKL2Q92772 493 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF300Q96RE9 604 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 NODALQ96S42 347 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 GHITMQ9H3K2 345 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 FIS1Q9Y3D6 152 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 TMEM191CA6NGB0 347 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 G3V2L1 256 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 H3BMM5 538 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CCNE2O96020 404 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CYP3A4P08684 503 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 MTHFD1P11586 935 aaKnown RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 LRPAP1P30533 357 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 TPD52P55327 224 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 NOMO3P69849 1222 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 TCP10Q12799 353 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 IRF5Q13568 498 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 GPR50Q13585 617 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 EFR3AQ14156 821 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 KRT39Q6A163 491 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 BEST2Q8NFU1 509 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 OR9I1Q8NGQ6 314 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 TMEM181Q9P2C4 612 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 SCML1Q9UN30 329 aa10.63□□□□□ -0.71
CAPN3-203ENST00000349748 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-203ENST00000349748 CCDC154A6NI56 674 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 F5H423 210 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 hCG_1984214I3L0E3 225 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 NFIBO00712 420 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 MRASO14807 208 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 XPNPEP2O43895 674 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TGM2P21980 687 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms