RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 GSNP06396 782 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 ASNSP08243 561 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 TGFBR1P36897 503 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CCNA1P78396 465 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 VAC14Q08AM6 782 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 RBM48Q5RL73 367 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 CYHR1Q6ZMK1 362 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 HS3ST5Q8IZT8 346 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 OR6Q1Q8NGQ2 317 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 VMP1Q96GC9 406 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CDT1Q9H211 546 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 C8orf4Q9NR00 106 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 THG1LQ9NWX6 298 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 NUDT5Q9UKK9 219 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CARD8Q9Y2G2 431 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 PMF1-BGLAPU3KQ54 211 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 WDR81Q562E7 1941 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 SNX2O60749 519 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 LRIG2O94898 1065 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 DAG1Q14118 895 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CTU2Q2VPK5 515 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 MIER2Q8N344 545 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 MINDY1Q8N5J2 469 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CHDHQ8NE62 594 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 MUL1Q969V5 352 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 TUBGCP3Q96CW5 907 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 MOV10Q9HCE1 1003 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 MAP3K20Q9NYL2 800 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 PSME4Q14997 1843 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 PPP6CO00743 305 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 CCNKO75909 580 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 SPNP16150 400 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 ALDH7A1P49419 539 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 ALDH3A2P51648 485 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 GHRHRQ02643 423 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 HIST2H2ACQ16777 129 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 AASDHQ4L235 1098 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 RBM20Q5T481 1227 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 ZNF470Q6ECI4 717 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 ESRP1Q6NXG1 681 aaKnown RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 RALGPS2Q86X27 583 aaPredicted RBP15.32■□□□□ 0.04
LMNA-201ENST00000347559 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 MCMBPQ9BTE3 642 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 BTRCQ9Y297 605 aa15.32■□□□□ 0.04
LMNA-201ENST00000347559 BBIP1A8MTZ0 92 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 ZNF99A8MXY4 864 aaPredicted RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 EEF2KO00418 725 aaKnown RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 KCNK2O95069 426 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 STAG3L1P0CL83 205 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 PSMB9P28065 219 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 MAP2K4P45985 399 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 CD47Q08722 323 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 GALNT13Q8IUC8 556 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 TRIB2Q92519 343 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 TXNDC15Q96J42 360 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 SLAMF8Q9P0V8 285 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 GPSM3Q9Y4H4 160 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 TCRBV5S2A0A599 114 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 MAGEB16A2A368 324 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 DAB1O75553 588 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 PIGAP37287 484 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 NPY2RP49146 381 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 MRPS15P82914 257 aaKnown RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 UGP2Q16851 508 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 HABP4Q5JVS0 413 aaKnown RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 BTBD8Q5XKL5 378 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 ZNF555Q8NEP9 628 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 OR7G1Q8NGA0 311 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 ELMO1Q92556 727 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 HDAC2Q92769 488 aaKnown RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.31■□□□□ 0.043e-6■■■■■ 49
LMNA-201ENST00000347559 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 MRPL45Q9BRJ2 306 aaKnown RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
LMNA-201ENST00000347559 CNGB3Q9NQW8 809 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 AASSQ9UDR5 926 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 SLC2A6Q9UGQ3 507 aa15.31■□□□□ 0.04
LMNA-201ENST00000347559 DYRK3O43781 588 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 CYP2B6P20813 491 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 CXCR2P25025 360 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 SLC1A2P43004 574 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 RACK1P63244 317 aaKnown RBP15.3■□□□□ 0.04
LMNA-201ENST00000347559 PLIN5Q00G26 463 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 COLEC12Q5KU26 742 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 GATAD2AQ86YP4 633 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 DEFB106AQ8N104 65 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 LEMD2Q8NC56 503 aa15.3■□□□□ 0.04
LMNA-201ENST00000347559 OR13J1Q8NGT2 312 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms