RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ERVW-1Q9UQF0 538 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 PCCBP05166 539 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ZNF132P52740 706 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 AKIRIN2Q53H80 203 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 GALNT13Q8IUC8 556 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 DNAJC11Q9NVH1 559 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 NT5C1B-RDH14C9J2C7 533 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 FUCA2Q9BTY2 467 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 TMEM27Q9HBJ8 222 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 ABI3Q9P2A4 366 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 PRODHO43272 600 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 SPAM1P38567 509 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 TSPAN14Q8NG11 270 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 SMG7Q92540 1137 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 SEC24AO95486 1093 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CMPK1P30085 196 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 HOXC12P31275 282 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 RAB2AP61019 212 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CYP4F2P78329 520 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CYP4F3Q08477 520 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CHST15Q7LFX5 561 aaPredicted RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 DAW1Q8N136 415 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CORO1AP31146 461 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 PDX1P52945 283 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 SPATA6LQ8N4H0 392 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 SRFBP1Q8NEF9 429 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 TCF12Q99081 682 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 GLOD4Q9HC38 313 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 ZNF222Q9UK12 451 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 H3BM21 787 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 PER2O15055 1255 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CCT3P49368 545 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CACNG1Q06432 222 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 ABCG8Q9H221 673 aa23.06■■□□□ 1.28
NPAS3-201ENST00000346562 AGO3Q9H9G7 860 aaKnown RBP23.06■■□□□ 1.28
NPAS3-201ENST00000346562 CCDC162PA2VCL2 907 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 PAPSS1O43252 624 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 DUSP4Q13115 394 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 ATAT1Q5SQI0 421 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 MCRS1Q96EZ8 462 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 NEUROD4Q9HD90 331 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 PTPRJQ12913 1337 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 TAF4O00268 1085 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 PRKAR1AP10644 381 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 FAUP35544 74 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 TRAP1Q12931 704 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 PPIGQ13427 754 aaKnown RBP eCLIP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 STRADAQ7RTN6 431 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 HPS6Q86YV9 775 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 SFRP1Q8N474 314 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 SHC3Q92529 594 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 RBMXL2O75526 392 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 BANF1O75531 89 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 RNASEH2AO75792 299 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 HTR7P34969 479 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 ERVK-21P61565 698 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 LARS2Q15031 903 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 ADCY4Q8NFM4 1077 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 OR5B17Q8NGF7 314 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 OR6K2Q8NGY2 324 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 CRELD1Q96HD1 420 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 MATN4O95460 622 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 NR2F6P10588 404 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 TCF4P15884 667 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 CBX5P45973 191 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 UBAP2LQ14157 1087 aaKnown RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 IPCEF1Q8WWN9 437 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-201ENST00000346562 HAS1Q92839 578 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 ZHX1-C8orf76Q96EF9 292 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 TRMOQ9BU70 441 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 LHX5Q9H2C1 402 aa23.05■■□□□ 1.28
NPAS3-201ENST00000346562 LRIG2O94898 1065 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 TMPRSS11BQ86T26 416 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 C12orf29Q8N999 325 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 SLC4A11Q8NBS3 891 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 ZNF490Q9ULM2 529 aaPredicted RBP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 CASP7P55210 303 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 PDK4Q16654 411 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 C10orf107Q8IVU9 208 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 CFAP52Q8N1V2 620 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 KLHL5Q96PQ7 755 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 PURBQ96QR8 312 aaKnown RBP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 NXF3Q9H4D5 531 aaKnown RBP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 ZMPSTE24O75844 475 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 DBTP11182 482 aaKnown RBP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 ITPKAP23677 461 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 AUHQ13825 339 aaKnown RBP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 SH3RF1Q7Z6J0 888 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 DHDDSQ86SQ9 333 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 IRGQQ8WZA9 623 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 MFSD14AQ96MC6 490 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 ACAT2Q9BWD1 397 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 DHRS12A0PJE2 317 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 C22orf31O95567 290 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 SERPINA1P01009 418 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 CLUP10909 449 aa23.04■■□□□ 1.28
NPAS3-201ENST00000346562 HNRNPLP14866 589 aaKnown RBP eCLIP23.04■■□□□ 1.28
NPAS3-201ENST00000346562 ASMTP46597 345 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms