RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MT-ND3P03897 115 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 CD86P42081 329 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 DGKGP49619 791 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 WNT3AP56704 352 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 DSC2Q02487 901 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ENPP2Q13822 863 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 FUT11Q495W5 492 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ANKRD20A4Q4UJ75 823 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 DENND5AQ6IQ26 1287 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 CXorf57Q6NSI4 855 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 IL27RAQ6UWB1 636 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 RANBP10Q6VN20 620 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 TPGS1Q6ZTW0 290 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 BCAS4Q8TDM0 211 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 SETD7Q8WTS6 366 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 LRIG1Q96JA1 1093 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 CINPQ9BW66 212 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ACE2Q9BYF1 805 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 PCDHGB2Q9Y5G2 931 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 A0A087WV48 116 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 A0A1W2PPM1 405 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 GMNCA6NCL1 334 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 METTL12A8MUP2 240 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TRIM49D1C9J1S8 452 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TM9SF1O15321 606 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 FLRT2O43155 660 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TYROBPO43914 113 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 PIAS1O75925 651 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 IGLV3-19P01714 112 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MMP2P08253 660 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 KRT4P19013 534 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 CA4P22748 312 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 CCNFP41002 786 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MAXP61244 160 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 SLC18A2Q05940 514 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 DMTNQ08495 405 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 DNAJC3Q13217 504 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 CAMK2BQ13554 666 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MPPE1Q53F39 396 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MPP7Q5T2T1 576 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 RNF219Q5W0B1 726 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 C4orf33Q8N1A6 199 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 PGBD5Q8N414 524 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 OR52K2Q8NGK3 314 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 C1orf216Q8TAB5 229 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 ARRDC2Q8TBH0 407 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 COL26A1Q96A83 441 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TMA16Q96EY4 203 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 APOPT1Q96IL0 206 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 RANBP9Q96S59 729 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 CDC6Q99741 560 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 CPNE1Q99829 537 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MGME1Q9BQP7 344 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 GPR174Q9BXC1 333 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MKRN2Q9H000 416 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MUC3BQ9H195 1237 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 MKS1Q9NXB0 559 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 FNDC3AQ9Y2H6 1198 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TCAF1Q9Y4C2 921 aa13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-202ENST00000344114 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 NPC1O15118 1278 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 BCAT2O15382 392 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 SPAG7O75391 227 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 FAM107AO95990 144 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 ATXN1LP0C7T5 689 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 PAMP19021 973 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 CES1P23141 567 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 ADRA1DP25100 572 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 OXTRP30559 389 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 GP5P40197 560 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 TPMTP51580 245 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 IL9RQ01113 521 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 CDH18Q13634 790 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 STARD3Q14849 445 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 PCSK7Q16549 785 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 HLA-BQ31612 363 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 PDPK2PQ6A1A2 396 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 PACS1Q6VY07 963 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 KCNMB4Q86W47 210 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 CARNMT1Q8N4J0 409 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 BANPQ8N9N5 519 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 MGARPQ8TDB4 240 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 FCRL3Q96P31 734 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 PSKH2Q96QS6 385 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 SEMA3CQ99985 751 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 SPON2Q9BUD6 331 aa13.51□□□□□ -0.25
HERPUD1-202ENST00000344114 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms