RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MAPRE2Q15555 327 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ARMC3Q5W041 872 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 CYP2R1Q6VVX0 501 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ANKS3Q6ZW76 656 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 LARP4Q71RC2 724 aaKnown RBP eCLIP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 MAGEH1Q9H213 219 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GMPR2Q9P2T1 348 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GALPQ9UBC7 116 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 BCAP29Q9UHQ4 241 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 RIMS3Q9UJD0 308 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 RNF112Q9ULX5 631 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 H7C4K7 107 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ARVCFO00192 962 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 INSIG1O15503 277 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 TBC1D4O60343 1298 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 NDUFS3O75489 264 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 CRTAMO95727 393 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 EPOP01588 193 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC26A3P40879 764 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 KPNA1P52294 538 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF140P52738 457 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 STX1BP61266 288 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 TSNQ15631 228 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ZFP1Q6P2D0 407 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GPR150Q8NGU9 434 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 SEMA4BQ9NPR2 832 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ASB3Q9Y575 518 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 PRORSD1PA6NEY8 169 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 H3BNC9 293 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 NR5A2O00482 541 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GPR39O43194 453 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 INHAP05111 366 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 EEF1DP29692 281 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 XIAPP98170 497 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ECT2LQ008S8 904 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GALNT1Q10472 559 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 LAMB3Q13751 1172 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GRB7Q14451 532 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 TLR1Q15399 786 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 UGT3A2Q3SY77 523 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 IL23RQ5VWK5 629 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 LHX8Q68G74 356 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 CLYBLQ8N0X4 340 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 TWIST2Q8WVJ9 160 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 BHMTQ93088 406 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 WBP2Q969T9 261 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 SCLYQ96I15 445 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF599Q96NL3 588 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 PSKH2Q96QS6 385 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 GPR21Q99679 349 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 MUC3BQ9H195 1237 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 AGO1Q9UL18 857 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 NPEPPSL1A6NEC2 478 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 CDC7O00311 574 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 OR1I1O60431 355 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 CLASP2O75122 1294 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 LINC00032P0C843 101 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 OGNP20774 298 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 CDH4P55283 916 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 NFKB2Q00653 900 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 PTPRNQ16849 979 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 NAT14Q8WUY8 206 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ATOH8Q96SQ7 321 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC30A3Q99726 388 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 UNC93B1Q9H1C4 597 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 SEMA6AQ9H2E6 1030 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 NLE1Q9NVX2 485 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 UTP6Q9NYH9 597 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 TAS2R13Q9NYV9 303 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 EPS15L1Q9UBC2 864 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 AZIN1O14977 448 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 PEX1O43933 1283 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 NRP2O60462 931 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 RNASEH2AO75792 299 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 CSPG5O95196 566 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF177Q13360 481 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 RNF219Q5W0B1 726 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 NPAS4Q8IUM7 802 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 PIANPQ8IYJ0 282 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 FBXO39Q8N4B4 442 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 LPGAT1Q92604 370 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ESAMQ96AP7 390 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 TUBGCP3Q96CW5 907 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ASB9Q96DX5 294 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC25A23Q9BV35 468 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 SARS2Q9NP81 518 aaKnown RBP14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 SPAG4Q9NPE6 437 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 FKBPLQ9UIM3 349 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 PCDHGB4Q9UN71 923 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 MED16Q9Y2X0 877 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 PCDHGB5Q9Y5G0 923 aa14.84□□□□□ -0.03
VIPAS39-202ENST00000343765 ZNF840PA6NDX5 716 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 BTN3A1O00481 513 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SNAP91O60641 907 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 CRCPO75575 148 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SUOXP51687 545 aa14.83□□□□□ -0.04
VIPAS39-202ENST00000343765 SLC7A2P52569 658 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms