RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DNAJC11Q9NVH1 559 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 RCOR3Q9P2K3 495 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 GTF2IRD1Q9UHL9 959 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 BTNL10A8MVZ5 291 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CDH13P55290 713 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 SPIBQ01892 262 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 GNA12Q03113 381 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 DGCR6Q14129 220 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 NR1D2Q14995 579 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CAMK1DQ8IU85 385 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 SRFBP1Q8NEF9 429 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 GINS4Q9BRT9 223 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 EQTNQ9NQ60 294 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 POLR3HQ9Y535 204 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 H7C0S8 307 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 WARSP23381 471 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 TNK2Q07912 1038 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 ARSHQ5FYA8 562 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CCNYL2Q5T2Q4 361 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 VITQ6UXI7 678 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 OTOP3Q7RTS5 596 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 XYLT1Q86Y38 959 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 HEPHQ9BQS7 1158 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 KLHL25Q9H0H3 589 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 HBS1LQ9Y450 684 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 RBM7Q9Y580 266 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 ICAM3P32942 547 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CDH5P33151 784 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 ARHGAP36Q6ZRI8 547 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 TEX47Q8TBZ9 253 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 PTCD3Q96EY7 689 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 TOR4AQ9NXH8 423 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CD84Q9UIB8 345 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 IKZF3Q9UKT9 509 aa14.98□□□□□ -0.01
UBE3B-202ENST00000342494 MAP2P11137 1827 aaKnown RBP14.98□□□□□ -0.01
UBE3B-202ENST00000342494 CLDN4O14493 209 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 SLC31A1O15431 190 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 COX4I1P13073 169 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 IDO1P14902 403 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CMPK1P30085 196 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 TAS2R41P59536 307 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CACNG1Q06432 222 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 BST1Q10588 318 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CPTPQ5TA50 214 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PRSS55Q6UWB4 352 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 OR10H5Q8NGA6 315 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 DGCR6LQ9BY27 220 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ACSS3Q9H6R3 686 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PRDM8Q9NQV8 689 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 SATB2Q9UPW6 733 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PRKAB1Q9Y478 270 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 GMPPBQ9Y5P6 360 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 KIF1CO43896 1103 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 MATN4O95460 622 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ATP6V1G2O95670 118 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CCNA2P20248 432 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PSMD4P55036 377 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 DGUOKQ16854 277 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PEX5LQ8IYB4 626 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 SCLYQ96I15 445 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 RHOJQ9H4E5 214 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 C11orf49Q9H6J7 331 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PTGFRNQ9P2B2 879 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 A0A0G2JLL6 359 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 OR2AG2A6NM03 316 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 HTR7P34969 479 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PRRT2Q7Z6L0 340 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CLVS1Q8IUQ0 354 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 C1orf127Q8N9H9 656 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 EIF1ADQ8N9N8 165 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 TTC29Q8NA56 475 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 IPCEF1Q8WWN9 437 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ZNF214Q9UL59 606 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 MAFBQ9Y5Q3 323 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 TRBC1P01850 177 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 MAT2AP31153 395 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ARL2P36404 184 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 TAF5Q15542 800 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 KLHL12Q53G59 568 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CERS6Q6ZMG9 384 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 FAM98AQ8NCA5 519 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 NEK7Q8TDX7 302 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PCED1BQ96HM7 432 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 SLC38A3Q99624 504 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 KIFC1Q9BW19 673 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CAB39LQ9H9S4 337 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 DDX18Q9NVP1 670 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 RAB21Q9UL25 225 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 FSCN2O14926 492 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ZMPSTE24O75844 475 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 PIAS1O75925 651 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 UGT1A5P35504 534 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 GPD2P43304 727 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 ZNF132P52740 706 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 NRF1Q16656 503 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 RNASEH2BQ5TBB1 312 aaKnown RBP14.97□□□□□ -0.01
UBE3B-202ENST00000342494 TTC23Q5W5X9 447 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 POMZP3Q6PJE2 187 aa14.97□□□□□ -0.01
UBE3B-202ENST00000342494 CFAP206Q8IYR0 622 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms