RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 DXOO77932 396 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 LCA5LO95447 670 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 IVLP07476 585 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 ITPKBP27987 946 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 RBMS1P29558 406 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 ABCG1P45844 678 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 HADHBP55084 474 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 ZBTB17Q13105 803 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 C14orf28Q4W4Y0 310 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 DOK6Q6PKX4 331 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 NT5DC3Q86UY8 548 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 Q8N9G6 341 aaPredicted RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 KIAA1524Q8TCG1 905 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 OLFM3Q96PB7 478 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 GFM1Q96RP9 751 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 RIOK2Q9BVS4 552 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 LRRN3Q9H3W5 708 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 SPATS2LQ9NUQ6 558 aaKnown RBP20.08■□□□□ 0.81
SYNE2-201ENST00000341472 SEPT10Q9P0V9 454 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 LRIT1Q9P2V4 623 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 APPL1Q9UKG1 709 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 SATB2Q9UPW6 733 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 TMEM98Q9Y2Y6 226 aa20.08■□□□□ 0.81
SYNE2-201ENST00000341472 CELSR3Q9NYQ7 3312 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 FGF1P05230 155 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 RPLP0P05388 317 aaKnown RBP20.07■□□□□ 0.8
SYNE2-201ENST00000341472 PNLIPP16233 465 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 ADCY8P40145 1251 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 CDKN2BP42772 138 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 NR2C2P49116 596 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 ERVPABLB-1P60509 514 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 TAZQ16635 292 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 C3orf38Q5JPI3 329 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 CERCAMQ5T4B2 595 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 NRROSQ86YC3 692 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 SFTPA2Q8IWL1 248 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 EXD1Q8NHP7 514 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 CCHCR1Q8TD31 782 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 HIC2Q96JB3 615 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 AGAP2Q99490 1192 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 CEP41Q9BYV8 373 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 SLC25A51Q9H1U9 297 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 FAM83DQ9H4H8 585 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 LUC7LQ9NQ29 371 aaKnown RBP20.07■□□□□ 0.8
SYNE2-201ENST00000341472 TAAR2Q9P1P5 351 aa20.07■□□□□ 0.8
SYNE2-201ENST00000341472 C1orf232A0A0U1RR37 186 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 RGSL1A5PLK6 1076 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 PSTPIP1O43586 416 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 ZRANB2O95218 330 aaKnown RBP eCLIP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 SOD1P00441 154 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 ZNF75DP51815 510 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 CTBSQ01459 385 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 CCDC173Q0VFZ6 552 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 PEX6Q13608 980 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 HLTFQ14527 1009 aaKnown RBP eCLIP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 LLGL1Q15334 1064 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 FAM182AQ5T1J6 154 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 B4GALNT4Q76KP1 1039 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 KDELC2Q7Z4H8 507 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 CCNJLQ8IV13 435 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 RCOR2Q8IZ40 523 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 ZNF248Q8NDW4 579 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 WDR36Q8NI36 951 aaKnown RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 ZDHHC1Q8WTX9 485 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 PTCD2Q8WV60 388 aaKnown RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 IMP4Q96G21 291 aaKnown RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 SCARF2Q96GP6 870 aaPredicted RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 SLC46A1Q96NT5 459 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 THSD1Q9NS62 852 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 PCDHGA8Q9Y5G5 932 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 EPN1Q9Y6I3 576 aaPredicted RBP20.06■□□□□ 0.8
SYNE2-201ENST00000341472 RNF215Q9Y6U7 377 aa20.06■□□□□ 0.8
SYNE2-201ENST00000341472 A0A1W2PNU3 283 aaPredicted RBP20.05■□□□□ 0.8
SYNE2-201ENST00000341472 A0A1W2PQM1 296 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 NUDT21O43809 227 aaKnown RBP20.05■□□□□ 0.8
SYNE2-201ENST00000341472 CST8O60676 142 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 ASMTLO95671 621 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 AK4P27144 223 aaPredicted RBP20.05■□□□□ 0.8
SYNE2-201ENST00000341472 SPINT3P49223 89 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 TEX44Q53QW1 395 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 KAZNQ674X7 775 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 CCDC70Q6NSX1 233 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 FOXR1Q6PIV2 292 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 IGF2-ASQ6U949 168 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 SPOCD1Q6ZMY3 1216 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 PANX2Q96RD6 677 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 STRADBQ9C0K7 418 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 RBSNQ9H1K0 784 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 GLOD4Q9HC38 313 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 PKD2L2Q9NZM6 624 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 SAE1Q9UBE0 346 aaPredicted RBP20.05■□□□□ 0.8
SYNE2-201ENST00000341472 ITPR1Q14643 2758 aa20.05■□□□□ 0.8
SYNE2-201ENST00000341472 CCDC187A0A096LP49 1063 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 A0A0A6YYK5 440 aaPredicted RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 INPP4BO15327 924 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 INHBCP55103 352 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 PCBP4P57723 403 aaKnown RBP20.04■□□□□ 0.8
SYNE2-201ENST00000341472 CDK18Q07002 472 aa20.04■□□□□ 0.8
SYNE2-201ENST00000341472 BIRC2Q13490 618 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms