RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC35B2Q8TB61 432 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 GLMNQ92990 594 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 TSACCQ96A04 125 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-202ENST00000340477 MRGPRX2Q96LB1 330 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 LRRC61Q9BV99 259 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 TEX101Q9BY14 249 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 FAM83DQ9H4H8 585 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 JRKLQ9Y4A0 524 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 LOC285095A0A1B0GVY8 99 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 TCRBV7S2A1N4TA0A589 114 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 SIGLEC6O43699 453 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 KIF5CO60282 957 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 CDK4P11802 303 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 SLC1A5Q15758 541 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 SIRPB2Q5JXA9 342 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 GKN2Q86XP6 184 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 SDR16C5Q8N3Y7 309 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 SCAMP4Q969E2 229 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 TMEM121Q9BTD3 319 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 FICDQ9BVA6 458 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 RIOK2Q9BVS4 552 aaKnown RBP19.12■□□□□ 0.65
SYNE4-202ENST00000340477 TLR10Q9BXR5 811 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 KCNF1Q9H3M0 494 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 USP29Q9HBJ7 922 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 KLF15Q9UIH9 416 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 ANGPTL2Q9UKU9 493 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 ZNF148Q9UQR1 794 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 ZKSCAN5Q9Y2L8 839 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 DGKBQ9Y6T7 804 aa19.12■□□□□ 0.65
SYNE4-202ENST00000340477 TMEM202A6NGA9 273 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 TPP1O14773 563 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 CEP104O60308 925 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 ATXN1LP0C7T5 689 aaKnown RBP19.11■□□□□ 0.65
SYNE4-202ENST00000340477 CKMT2P17540 419 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 STIP1P31948 543 aaKnown RBP19.11■□□□□ 0.65
SYNE4-202ENST00000340477 DUSP3P51452 185 aaPredicted RBP19.11■□□□□ 0.65
SYNE4-202ENST00000340477 CDKN3Q16667 212 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 ZCCHC8Q6NZY4 707 aaKnown RBP19.11■□□□□ 0.65
SYNE4-202ENST00000340477 GLT6D1Q7Z4J2 308 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 BLOC1S5Q8TDH9 187 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 ATG4AQ8WYN0 398 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 PDXPQ96GD0 296 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 HIC2Q96JB3 615 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 ZSCAN5AQ9BUG6 496 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 CYP4F12Q9HCS2 524 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 FGF22Q9HCT0 170 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 NCOR2Q9Y618 2525 aa19.11■□□□□ 0.65
SYNE4-202ENST00000340477 PRSS38A1L453 326 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 LMO7DNF2Z398 122 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 TRIM38O00635 465 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 LIASO43766 372 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 GCATO75600 419 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 RFPL3O75679 317 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 FGGP02679 453 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 PMLP29590 882 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 RPIAP49247 311 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 DCDC1P59894 354 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 C1orf61Q13536 156 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 LONRF2Q1L5Z9 754 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 PARP6Q2NL67 630 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 DEFB133Q30KQ1 61 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 ZNF569Q5MCW4 686 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 ZDHHC20Q5W0Z9 365 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 ALS2CLQ60I27 953 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 DOK6Q6PKX4 331 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 RFLNAQ6ZTI6 216 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 PELI3Q8N2H9 469 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 CCDC89Q8N998 374 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 C1orf54Q8WWF1 131 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 OR1E3Q8WZA6 343 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 LGR4Q9BXB1 951 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 SPATA16Q9BXB7 569 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 TCEAL2Q9H3H9 227 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-202ENST00000340477 CARS2Q9HA77 564 aaKnown RBP19.1■□□□□ 0.65
SYNE4-202ENST00000340477 FEZ2Q9UHY8 353 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-202ENST00000340477 PCDHGA1Q9Y5H4 931 aa19.1■□□□□ 0.65
SYNE4-202ENST00000340477 PSMD3O43242 534 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 IFNB1P01574 187 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 DNAJC3Q13217 504 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 ILKQ13418 452 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 PEX6Q13608 980 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 PROX2Q3B8N5 592 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 HENMT1Q5T8I9 393 aaKnown RBP19.09■□□□□ 0.65
SYNE4-202ENST00000340477 PDPK2PQ6A1A2 396 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 TMC3Q7Z5M5 1100 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 ADAMTS14Q8WXS8 1223 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 TBL1YQ9BQ87 522 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 SUDS3Q9H7L9 328 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-202ENST00000340477 LRRC40Q9H9A6 602 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 HOMER3Q9NSC5 361 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
SYNE4-202ENST00000340477 NFKBIL1Q9UBC1 381 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-202ENST00000340477 PKP3Q9Y446 797 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 SCN8AQ9UQD0 1980 aa19.09■□□□□ 0.65
SYNE4-202ENST00000340477 ARID1BQ8NFD5 2236 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-202ENST00000340477 INPP4BO15327 924 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 ASMTLO95671 621 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 AGTP01019 485 aa19.08■□□□□ 0.64
SYNE4-202ENST00000340477 HMGCLP35914 325 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms