RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SPATA31D3P0C874 917 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TRAPPC2P0DI81 140 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TRAPPC2BP0DI82 140 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GM2AP17900 193 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 DNASE1P24855 282 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GTF2E2P29084 291 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 EIF2S3P41091 472 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PIK3CBP42338 1070 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 IDH3AP50213 366 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KCTD2Q14681 263 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TIGD6Q17RP2 521 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 CLEC16AQ2KHT3 1053 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NAPRTQ6XQN6 538 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SPATA31D4Q6ZUB0 917 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 EEF1AKMT1Q8WVE0 214 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NR4A3Q92570 626 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MCEEQ96PE7 176 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SLC6A17Q9H1V8 727 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GANQ9H2C0 597 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 DPAGT1Q9H3H5 408 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MTMR10Q9NXD2 777 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PCDHA6Q9UN73 950 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PCDHA8Q9Y5H6 950 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 A0A087X0B3 334 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 CASKO14936 926 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KPNA6O60684 536 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MYF6P23409 242 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GABARAPL2P60520 117 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ACOX1Q15067 660 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SETMARQ53H47 684 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ANKRD54Q6NXT1 300 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 AHSA2Q719I0 299 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 UBE2J2Q8N2K1 259 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 VWA5B2Q8N398 1253 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 C11orf24Q96F05 449 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NPLQ9BXD5 320 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 BEX2Q9BXY8 128 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PIF1Q9H611 641 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NIPAL2Q9H841 368 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TAS2R7Q9NYW3 318 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MGAT4BQ9UQ53 548 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 AP2A2O94973 939 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 SOX30O94993 753 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 EPHA3P29320 983 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 CTNNB1P35222 781 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 GRIA2P42262 883 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 RGS19P49795 217 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 SMAD1Q15797 465 aaKnown RBP12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF470Q6ECI4 717 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 MSANTD1Q6ZTZ1 278 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 LACC1Q8IV20 430 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 FEM1AQ9BSK4 669 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 TTYH3Q9C0H2 523 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 A6NL46 340 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 C5orf58C9J3I9 102 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 TADA2AO75478 443 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 IGFBP5P24593 272 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 TSPAN5P62079 268 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 GRAPQ13588 217 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 GRB14Q14449 540 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 DUSP6Q16828 381 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 C21orf62-AS1Q17RA5 79 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 C1orf189Q5VU69 101 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-201ENST00000339717 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 LNX2Q8N448 690 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 DPP10Q8N608 796 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 CNDP2Q96KP4 475 aaKnown RBP12.61□□□□□ -0.39
BRPF3-201ENST00000339717 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 DLGAP4Q9Y2H0 992 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 E9PAM4 449 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 DHX15O43143 795 aaKnown RBP12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ADAM12O43184 909 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 TXNL1O43396 289 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 ULK1O75385 1050 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 PRKCAP17252 672 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 MTHFRP42898 656 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 RAB12Q6IQ22 244 aa12.61□□□□□ -0.39
BRPF3-201ENST00000339717 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms