RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TTPAP49638 278 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CDKN1CP49918 316 aaPredicted RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CDKN2DP55273 166 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 POLR2LP62875 67 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 IRX4P78413 519 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TIAL1Q01085 375 aaKnown RBP eCLIP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 SATB1Q01826 763 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CACNG1Q06432 222 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 AARS2Q5JTZ9 985 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 OTOAQ7RTW8 1153 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CCDC63Q8NA47 563 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CCDC197Q8NCU1 140 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 GRIN3AQ8TCU5 1115 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 HCAR2Q8TDS4 363 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CHFRQ96EP1 664 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 KXD1Q9BQD3 176 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 AARSD1Q9BTE6 412 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 BRD9Q9H8M2 597 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 PLA2G4CQ9UP65 541 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 SCN8AQ9UQD0 1980 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 ZNF106Q9H2Y7 1883 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 ARNTLO00327 626 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 LEFTY1O75610 366 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CTSLP07711 333 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 NEFHP12036 1026 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CPA3P15088 417 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 LHCGRP22888 699 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 PTPN5P54829 565 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 ADARP55265 1226 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 KDSRQ06136 332 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 DLG1Q12959 904 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 ITIH4Q14624 930 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CHI3L2Q15782 390 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TSNAXIP1Q2TAA8 658 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 LRIT3Q3SXY7 679 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 CES4AQ5XG92 561 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 ATG16L1Q676U5 607 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 C6orf89Q6UWU4 347 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 SPATA21Q7Z572 469 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TSPAN33Q86UF1 283 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 SPATS2Q86XZ4 545 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 SMRP1Q8NCR6 262 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TTC8Q8TAM2 541 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 RDH11Q8TC12 318 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 UBXN10Q96LJ8 280 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TSNARE1Q96NA8 513 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 MTG2Q9H4K7 406 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 POPDC3Q9HBV1 291 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 IL36AQ9UHA7 158 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 APPL1Q9UKG1 709 aa15.42■□□□□ 0.06
LIMS1-202ENST00000338045 RUVBL2Q9Y230 463 aaKnown RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
LIMS1-202ENST00000338045 TMEM265A0A087WTH1 108 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 TARM1B6A8C7 271 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 G3V2L1 256 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 PFDN6O15212 129 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 NDUFS3O75489 264 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 SRP72O76094 671 aaKnown RBP15.41■□□□□ 0.06
LIMS1-202ENST00000338045 SBK3P0C264 359 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 FGF3P11487 239 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-202ENST00000338045 BPIP17213 487 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 BST1Q10588 318 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 ZRANB3Q5FWF4 1079 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 ARSIQ5FYB1 569 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 LRRC66Q68CR7 880 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 CERS6Q6ZMG9 384 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 TBC1D1Q86TI0 1168 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-202ENST00000338045 OR6Y1Q8NGX8 325 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 NXNL1Q96CM4 212 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 TSSK1BQ9BXA7 367 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 TTYH1Q9H313 450 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-202ENST00000338045 GPAMQ9HCL2 828 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 IL26Q9NPH9 171 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 IGSF5Q9NSI5 407 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 MID2Q9UJV3 735 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
LIMS1-202ENST00000338045 TRBV5-4A0A0C4DH59 114 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 SNNO75324 88 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 CD9P21926 228 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 GDI1P31150 447 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 OCRLQ01968 901 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 PTSQ03393 145 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 HNRNPA1L2Q32P51 320 aaKnown RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 ZNF805Q5CZA5 627 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 NAIF1Q69YI7 327 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 LRRC8EQ6NSJ5 796 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 TMEM207Q6UWW9 146 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 C10orf107Q8IVU9 208 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 SFTPA1Q8IWL2 248 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 FSTL5Q8N475 847 aaPredicted RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 C7orf26Q96N11 449 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 NECTIN4Q96NY8 510 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 BIRC8Q96P09 236 aa15.4■□□□□ 0.06
LIMS1-202ENST00000338045 RPP25Q9BUL9 199 aaKnown RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 TRMT61BQ9BVS5 477 aaKnown RBP15.4■□□□□ 0.06
LIMS1-202ENST00000338045 TMEM245Q9H330 911 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms