RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 NPPAP01160 153 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RHOP08100 348 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 C1SP09871 688 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 BMP1P13497 986 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 GNAZP19086 355 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LPOP22079 712 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MMP12P39900 470 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SLC6A12P48065 614 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 IDH3AP50213 366 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 IFT88Q13099 833 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 OLIG2Q13516 323 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 N4BP2L1Q5TBK1 243 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TPRG1Q6ZUI0 275 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 BBS7Q8IWZ6 715 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 OR2A12Q8NGT7 310 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 OR4L1Q8NH43 312 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RPRD1AQ96P16 312 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 AGAP3Q96P47 875 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LRRC3BQ96PB8 259 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 PGLYRP2Q96PD5 576 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SEMA3CQ99985 751 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 GPATCH1Q9BRR8 931 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 GPAMQ9HCL2 828 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TRIM39Q9HCM9 518 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MARCH4Q9P2E8 410 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ABCD2Q9UBJ2 740 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 APOBEC2Q9Y235 224 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RAI2Q9Y5P3 530 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 A0A096LPK6 155 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CCDC162PA2VCL2 907 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 DFFAO00273 331 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TOR1BO14657 336 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CD3EAPO15446 510 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TLL1O43897 1013 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 XYLBO75191 536 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 GPC4O75487 556 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SLCO2B1O94956 709 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CALB2P22676 271 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SLCO1A2P46721 670 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 VPS41P49754 854 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 B4GALNT1Q00973 533 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 FOXM1Q08050 763 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 KIAA0040Q15053 153 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MYLK3Q32MK0 819 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 FASTKD1Q53R41 847 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 C10orf62Q5T681 223 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RNF219Q5W0B1 726 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 PSAPL1Q6NUJ1 521 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ANKRD54Q6NXT1 300 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LARP4Q71RC2 724 aaKnown RBP eCLIP5.34□□□□□ -1.558e-8■□□□□ 10
PRPF4B-201ENST00000337659 CCDC25Q86WR0 208 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LRRC56Q8IYG6 542 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TCF25Q9BQ70 676 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CYP4F11Q9HBI6 524 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MAN1C1Q9NR34 630 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ABCF3Q9NUQ8 709 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 NUDT4Q9NZJ9 180 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LSM7Q9UK45 103 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 AP1M2Q9Y6Q5 423 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TRIM13O60858 407 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 HAUS5O94927 633 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 WDR47O94967 919 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CYP17A1P05093 508 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RAG1P15918 1043 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ITGB7P26010 798 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RPS24P62847 133 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CARD16Q5EG05 197 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 PLEKHS1Q5SXH7 462 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SBSNQ6UWP8 590 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TRIM46Q7Z4K8 759 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CAMKMTQ7Z624 323 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 RALGPS2Q86X27 583 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 C7orf61Q8IZ16 206 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 FSTL5Q8N475 847 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 NKAPQ8N5F7 415 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TRAM1L1Q8N609 369 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 PPM1NQ8N819 430 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 AGAP11Q8TF27 550 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 POF1BQ8WVV4 589 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MRPS31Q92665 395 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 LENG8Q96PV6 779 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ZNF382Q96SR6 550 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 NTMT1Q9BV86 223 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 SARGQ9BW04 601 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CINPQ9BW66 212 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 EBF2Q9HAK2 575 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 HPS4Q9NQG7 708 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 HEBP1Q9NRV9 189 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 CATSPERZQ9NTU4 200 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TDP1Q9NUW8 608 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 ERVW-1Q9UQF0 538 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 VWA7Q9Y334 891 aa5.34□□□□□ -1.55
PRPF4B-201ENST00000337659 TMEM131Q92545 1883 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 C17orf113A0A1B0GUU1 675 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 A8MT66 165 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 NT5C1B-RDH14C9J2C7 533 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 CASQ2O14958 399 aaPredicted RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms