RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
MRPL55-203ENST00000336520 LRP4O75096 1905 aa11.32□□□□□ -0.6
MRPL55-203ENST00000336520 APC2O95996 2303 aa11.32□□□□□ -0.6
MRPL55-203ENST00000336520 ACACAQ13085 2346 aa11.32□□□□□ -0.6
MRPL55-203ENST00000336520 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 GRID2IPA4D2P6 1211 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 SRRM3A6NNA2 597 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 H7C0C1 242 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PJA2O43164 708 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PMPCBO75439 489 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PYGLP06737 847 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 CTNNA2P26232 953 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 GNPDA1P46926 289 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 ATP5OP48047 213 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 RWDD2BP57060 319 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 CDK18Q07002 472 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 ILF3Q12906 894 aaKnown RBP eCLIP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 SLC14A2Q15849 920 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PEX26Q7Z412 305 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PROSER1Q86XN7 944 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 NRSN1Q8IZ57 195 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 SPATA22Q8NHS9 363 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 TEKT5Q96M29 485 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 TRIB3Q96RU7 358 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 LYSMD1Q96S90 227 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 FRMD8Q9BZ67 464 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PKD2L2Q9NZM6 624 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 AK5Q9Y6K8 562 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 PKD1L2Q7Z442 2459 aa11.31□□□□□ -0.6
MRPL55-203ENST00000336520 SPEGQ15772 3267 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 HACD1B0YJ81 288 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 B4DGG1 531 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 F5H423 210 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-203ENST00000336520 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 INPP4BO15327 924 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CSO75390 466 aaKnown RBP11.3□□□□□ -0.6
MRPL55-203ENST00000336520 KRT37O76014 449 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 NDST3O95803 873 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 MT-CYBP00156 380 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-203ENST00000336520 SOD1P00441 154 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 APOC2P02655 101 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CEACAM5P06731 702 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 PIRTP0C851 137 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 NFKB1P19838 968 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 POLD2P49005 469 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 SPINT3P49223 89 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 PERM1Q5SV97 790 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CDCP2Q5VXM1 449 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 PID1Q7Z2X4 250 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 UBL4BQ8N7F7 174 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 HTR3CQ8WXA8 447 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CCDC74AQ96AQ1 378 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 AGAP2Q99490 1192 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 VAT1Q99536 393 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 CCDC3Q9BQI4 270 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 GPR63Q9BZJ6 419 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 DPEP2Q9H4A9 486 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 FAM83DQ9H4H8 585 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 ZFYVE1Q9HBF4 777 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 TRIM10Q9UDY6 481 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 AMFRQ9UKV5 643 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 SHOC2Q9UQ13 582 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
MRPL55-203ENST00000336520 ASXL3Q9C0F0 2248 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 DMXL2Q8TDJ6 3036 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
MRPL55-203ENST00000336520 RGSL1A5PLK6 1076 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 STK10O94804 968 aaKnown RBP11.29□□□□□ -0.6
MRPL55-203ENST00000336520 ASMTLO95671 621 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 CAPNS1P04632 268 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 IVLP07476 585 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 PTPN7P35236 360 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 WNT3AP56704 352 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 GSDMDP57764 484 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
MRPL55-203ENST00000336520 XRCC4Q13426 336 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 ALS2CLQ60I27 953 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 SLC30A9Q6PML9 568 aa11.29□□□□□ -0.6
MRPL55-203ENST00000336520 RBM44Q6ZP01 1051 aaKnown RBP11.29□□□□□ -0.6
MRPL55-203ENST00000336520 MARK2Q7KZI7 788 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms