RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 VAPBO95292 243 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 IGHV4-34P06331 123 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 SP9P0CG40 484 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 PAMP19021 973 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 BCKDHBP21953 392 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 SSTR1P30872 391 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 SPAM1P38567 509 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 CCR5P51681 352 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 PRAMEP78395 509 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 AGERQ15109 404 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 ZNF528Q3MIS6 628 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 KIAA0930Q6ICG6 404 aaPredicted RBP13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 EMBQ6PCB8 327 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 FAM151BQ6UXP7 276 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 CAPN12Q6ZSI9 719 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 C3orf62Q6ZUJ4 267 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 DEFB119Q8N690 84 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■■ 41.7
TUBA1B-202ENST00000336023 CADM4Q8NFZ8 388 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 OR6P1Q8NGX9 317 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 ASB12Q8WXK4 309 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 NELL1Q92832 810 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 AP2M1Q96CW1 435 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 NUS1Q96E22 293 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 RIOK2Q9BVS4 552 aaKnown RBP13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 CDH19Q9H159 772 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 APPL1Q9UKG1 709 aa13.67□□□□□ -0.22
TUBA1B-202ENST00000336023 BPTFQ12830 3046 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GLYATL1P3A0A0U1RQE8 302 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 CCDC162PA2VCL2 907 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 ARNTP27540 789 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 MC4RP32245 332 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 ARCN1P48444 511 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 NUBP1P53384 320 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 PMS2P54278 862 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 PTPN5P54829 565 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GPX6P59796 221 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 DCDC1P59894 354 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 XIAPP98170 497 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 SRSF5Q13243 272 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 PEX6Q13608 980 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 LRRC14Q15048 493 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 BRD3Q15059 726 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 WSCD2Q2TBF2 565 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 SETMARQ53H47 684 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 MICALCLQ6ZW33 695 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 TRMT10CQ7L0Y3 403 aaKnown RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 ZNF765Q7L2R6 523 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 UNC5BQ8IZJ1 945 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GSDMBQ8TAX9 411 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GAB3Q8WWW8 586 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 BIRC7Q96CA5 298 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 TTC25Q96NG3 672 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 C1QTNF7Q9BXJ2 289 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 ZSCAN32Q9NX65 697 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 NFKBIL1Q9UBC1 381 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 CACNA1HO95180 2353 aa13.66□□□□□ -0.22
TUBA1B-202ENST00000336023 TRPM6Q9BX84 2022 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 OR51F1A6NGY5 319 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 METTL12A8MUP2 240 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 GOLGA8KD6RF30 607 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 GAPDHSO14556 408 aaPredicted RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 RAD51BO15315 384 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 HRO43593 1189 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 PRAMEF1O95521 474 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 ACSL3O95573 720 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 GSTA2P09210 222 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 DPTQ07507 201 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 CHRNA6Q15825 494 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 LONRF1Q17RB8 773 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 UBAP2Q5T6F2 1119 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 HENMT1Q5T8I9 393 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 TRMT10BQ6PF06 316 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 NLRP8Q86W28 1048 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 CAVIN3Q969G5 261 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 CENPTQ96BT3 561 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 AGAP2Q99490 1192 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 SPATA16Q9BXB7 569 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 VPS37BQ9H9H4 285 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 FZD3Q9NPG1 666 aa13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 MBNL1Q9NR56 388 aaKnown RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 C20orf96Q9NUD7 363 aaPredicted RBP13.65□□□□□ -0.22
TUBA1B-202ENST00000336023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
TUBA1B-202ENST00000336023 CCDC151A5D8V7 595 aa13.64□□□□□ -0.23
TUBA1B-202ENST00000336023 K7ESM1 405 aa13.64□□□□□ -0.23
TUBA1B-202ENST00000336023 UGT1A9O60656 530 aa13.64□□□□□ -0.23
TUBA1B-202ENST00000336023 ERLIN1O75477 346 aa13.64□□□□□ -0.23
TUBA1B-202ENST00000336023 SPAG6O75602 509 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms