RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RBM38Q9H0Z9 239 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 AASDHPPTQ9NRN7 309 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 EBF1Q9UH73 591 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 NOTOA8MTQ0 251 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 INPP4BO15327 924 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 BAIAP3O94812 1187 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 MT-ND1P03886 318 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 ENDOUP21128 410 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 PGFP49763 221 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 PLIN5Q00G26 463 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 EFEMP1Q12805 493 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 RFTN1Q14699 578 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 RAB41Q5JT25 222 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 FAM209AQ5JX71 171 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 PPP2R2DQ66LE6 453 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 RANBP10Q6VN20 620 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 LRRTM3Q86VH5 581 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 IL12RB2Q99665 862 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 SUCOQ9UBS9 1254 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 SUPT3HB4E1H0 165 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 ZNF26P17031 533 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 CHRM3P20309 590 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 KCNC1P48547 511 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 ARSDP51689 593 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 YWHAHQ04917 246 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 CBR4Q8N4T8 237 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 GFM2Q969S9 779 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 KCNA7Q96RP8 456 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 AKTIPQ9H8T0 292 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 SEMA4BQ9NPR2 832 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 ITGB1BP2Q9UKP3 347 aa16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 CNOT6Q9ULM6 557 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-201ENST00000335793 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 A0A1W2PQH9 124 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 PABPC1P11940 636 aaKnown RBP16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 GRB14Q14449 540 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 ACAP2Q15057 778 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 PSMG2Q969U7 264 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 RPL10LQ96L21 214 aaKnown RBP16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 C3orf30Q96M34 536 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 TSGA13Q96PP4 275 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 ZNF385DQ9H6B1 395 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 ZNF696Q9H7X3 374 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 MARCH4Q9P2E8 410 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 CARD8Q9Y2G2 431 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 NDUFAF1Q9Y375 327 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 UBXN8O00124 270 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 H6PDO95479 791 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 CLIC3O95833 236 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 HGFP14210 728 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 CYP2C18P33260 490 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 CDKN2DP55273 166 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 CLYBLQ8N0X4 340 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 HMCESQ96FZ2 354 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 HS3ST4Q9Y661 456 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 PAPPA2Q9BXP8 1791 aa16.49■□□□□ 0.23
CDC42EP4-201ENST00000335793 AP1G1O43747 822 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 GLP2RO95838 553 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SLC7A1P30825 629 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 POLD2P49005 469 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 INPP5AQ14642 412 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 DDR2Q16832 855 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CIR1Q86X95 450 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CNTN4Q8IWV2 1026 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 DCBLD1Q8N8Z6 715 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CAPSLQ8WWF8 208 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SEPHS2Q99611 448 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 AGO3Q9H9G7 860 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CROCCQ5TZA2 2017 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 F8W810 466 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 PIP5K1BO14986 540 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CES1P23141 567 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 PSMA4P25789 261 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 DNAJB13P59910 316 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 GALNT3Q14435 633 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SLC39A12Q504Y0 691 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 DEPDC1Q5TB30 811 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 KIAA0408Q6ZU52 694 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 CHSY3Q70JA7 882 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 LIMS2Q7Z4I7 341 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 FAM110BQ8TC76 370 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 RPRD1AQ96P16 312 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 MCMBPQ9BTE3 642 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SLC25A51Q9H1U9 297 aa16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SARS2Q9NP81 518 aaKnown RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 HAPLN1P10915 354 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP4-201ENST00000335793 SLC2A3P11169 496 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms