RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 DNAJC28Q9NX36 388 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 TCAF1Q9Y4C2 921 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CFAP99D6REC4 459 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 STMN1P16949 149 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 TFEBP19484 476 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 KCNA5P22460 613 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 MLLT10P55197 1068 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 MLLT6P55198 1093 aaPredicted RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 IRF5Q13568 498 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CLPPQ16740 277 aaPredicted RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 LRRC8EQ6NSJ5 796 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 ZNF598Q86UK7 904 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 TMEM102Q8N9M5 508 aaPredicted RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 HEXDCQ8WVB3 486 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 EXT2Q93063 718 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 SPATA17Q96L03 361 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 OLFM1Q99784 485 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CRISPLD1Q9H336 500 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 GID8Q9NWU2 228 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 NYNRINQ9P2P1 1898 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 FBXO5Q9UKT4 447 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 DSEQ9UL01 958 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 TMEM88BA6NKF7 163 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 PSMD11O00231 422 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 TADA2AO75478 443 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 GSSP48637 474 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 TBX4P57082 545 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 RAB10P61026 200 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 SLC12A1Q13621 1099 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 PHKG1Q16816 387 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 TSTD2Q5T7W7 516 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 CRYL1Q9Y2S2 319 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 PCDHGA3Q9Y5H0 932 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 KCNU1A8MYU2 1149 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 SLC10A3P09131 477 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 CKBP12277 381 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 S100A1P23297 94 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 ADRA1AP35348 466 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 GRIA3P42263 894 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 TUFMP49411 452 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 ARSDP51689 593 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 DNASE1L3Q13609 305 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 IKBKEQ14164 716 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 BRMS1LQ5PSV4 323 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 VARS2Q5ST30 1063 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 BNC2Q6ZN30 1099 aaPredicted RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 PIM3Q86V86 326 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 LSMEM2Q8N112 164 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 TXNDC5Q8NBS9 432 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 GIPC2Q8TF65 315 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 TSGA13Q96PP4 275 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 GTSE1Q9NYZ3 720 aa13.88□□□□□ -0.19
SF1-202ENST00000334944 FNDC3AQ9Y2H6 1198 aaKnown RBP13.88□□□□□ -0.19
SF1-202ENST00000334944 SOBPA7XYQ1 873 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 SULT1C4O75897 302 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 HDCP19113 662 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 ACVRL1P37023 503 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 SLC12A2P55011 1212 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 GEMP55040 296 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 CTXN3Q4LDR2 81 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 TIGD2Q4W5G0 525 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 LIPMQ5VYY2 423 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 ANKRD26P1Q6NSI1 321 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 RANBP10Q6VN20 620 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 ZYG11AQ6WRX3 759 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 IGFN1Q86VF2 1251 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 PPWD1Q96BP3 646 aaKnown RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 SMIM14Q96QK8 99 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 GPR62Q9BZJ7 368 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 NOL11Q9H8H0 719 aaKnown RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 POLR1BQ9H9Y6 1135 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 SAC3D1A6NKF1 404 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 GRID2O43424 1007 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 RPL14P50914 215 aaKnown RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 INAQ16352 499 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 SEL1L3Q68CR1 1132 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 FBXL22Q6P050 247 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 CAPSLQ8WWF8 208 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 RPRD1AQ96P16 312 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 FAM193BQ96PV7 902 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 CLK4Q9HAZ1 481 aaKnown RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 SP110Q9HB58 689 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms