RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 BBIP1A8MTZ0 92 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 SYN3O14994 580 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 TACR2P21452 398 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 GRB7Q14451 532 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 FAM171A1Q5VUB5 890 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 KANK2Q63ZY3 851 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 DHFR2Q86XF0 187 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 TRPC4APQ8TEL6 797 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 DUS3LQ96G46 650 aaKnown RBP23.33■■□□□ 1.33
NDEL1-201ENST00000334527 ZFRQ96KR1 1074 aaKnown RBP23.33■■□□□ 1.33
NDEL1-201ENST00000334527 SLC2A11Q9BYW1 496 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 TFB2MQ9H5Q4 396 aaKnown RBP23.33■■□□□ 1.33
NDEL1-201ENST00000334527 IL1RL2Q9HB29 575 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 ACTL7AQ9Y615 435 aa23.33■■□□□ 1.33
NDEL1-201ENST00000334527 UBA6A0AVT1 1052 aaPredicted RBP23.33■■□□□ 1.32
NDEL1-201ENST00000334527 C7orf72A4D263 438 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 STAMBPO95630 424 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 CLCN2P51788 898 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 FCGRTP55899 365 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 BTG3Q14201 252 aaPredicted RBP23.33■■□□□ 1.32
NDEL1-201ENST00000334527 MTX3Q5HYI7 312 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 METTL25Q8N6Q8 603 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 LRCH3Q96II8 777 aa23.33■■□□□ 1.32
NDEL1-201ENST00000334527 CNOT6Q9ULM6 557 aaKnown RBP23.33■■□□□ 1.32
NDEL1-201ENST00000334527 A0A0D9SEW6 157 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 HSPA8P11142 646 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 CKBP12277 381 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 PSMC3P17980 439 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 DYNC1I2Q13409 638 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 IKBKEQ14164 716 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 SLC5A9Q2M3M2 681 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 C11orf91Q3C1V1 193 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 AMIGO2Q86SJ2 522 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 LGI2Q8N0V4 545 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 MIER2Q8N344 545 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 NMD3Q96D46 503 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 DGCR14Q96DF8 476 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 CDKN2AIPNLQ96HQ2 116 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 ZNF597Q96LX8 424 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 EFHD1Q9BUP0 239 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 GRIP2Q9C0E4 1043 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 ZNF839A8K0R7 811 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 SUPT3HB4E1H0 165 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 H0YJX3 145 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 CLASP2O75122 1294 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 SUPT3HO75486 399 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 NDST3O95803 873 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 RING1Q06587 406 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 TYSND1Q2T9J0 566 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 NADK2Q4G0N4 442 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 RBM44Q6ZP01 1051 aaKnown RBP23.32■■□□□ 1.32
NDEL1-201ENST00000334527 CRISPLD1Q9H336 500 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 TUBB1Q9H4B7 451 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 MAP10Q9P2G4 905 aa23.32■■□□□ 1.32
NDEL1-201ENST00000334527 RHOBTB1O94844 696 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 LSAMPQ13449 338 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 VPS26BQ4G0F5 336 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 ACBD5Q5T8D3 534 aaPredicted RBP23.31■■□□□ 1.32
NDEL1-201ENST00000334527 RGMBQ6NW40 437 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 PHYKPLQ8IUZ5 450 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 PPWD1Q96BP3 646 aaKnown RBP23.31■■□□□ 1.32
NDEL1-201ENST00000334527 TUBGCP3Q96CW5 907 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 TRIB3Q96RU7 358 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 NOL11Q9H8H0 719 aaKnown RBP23.31■■□□□ 1.32
NDEL1-201ENST00000334527 INTS10Q9NVR2 710 aaKnown RBP23.31■■□□□ 1.32
NDEL1-201ENST00000334527 RIMKLBQ9ULI2 386 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 RNF112Q9ULX5 631 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 FAM50BQ9Y247 325 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 BTRCQ9Y297 605 aa23.31■■□□□ 1.32
NDEL1-201ENST00000334527 F5H5T6 163 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 LINC00032P0C843 101 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 EEF1DP29692 281 aaKnown RBP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 FMO4P31512 558 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 KCNQ1P51787 676 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 INHBEP58166 350 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 MBTPS1Q14703 1052 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 AP1ARQ63HQ0 302 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 HMBOX1Q6NT76 420 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 PAQR3Q6TCH7 311 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 CHERPQ8IWX8 916 aaKnown RBP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 ZNF599Q96NL3 588 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 UHRF1Q96T88 793 aaPredicted RBP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 CIB1Q99828 191 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 GPATCH1Q9BRR8 931 aaKnown RBP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.3■■□□□ 1.32
NDEL1-201ENST00000334527 NDUFAF1Q9Y375 327 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 ANKRD36A6QL64 1941 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 OR6C75A6NL08 312 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 C9JVG2 144 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 TLR5O60602 858 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 KERAO60938 352 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 CAPN3P20807 821 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 GRIA3P42263 894 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 OR7D4Q8NG98 312 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 OR2T34Q8NGX1 318 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 OR2T3Q8NH03 318 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 STAG3L4Q8TBR4 150 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 KIAA1191Q96A73 305 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 GPR62Q9BZJ7 368 aa23.3■■□□□ 1.32
NDEL1-201ENST00000334527 SYTL2Q9HCH5 934 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms