RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ARPC4-TTLL3A0A0A6YYG9 625 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ACSL4O60488 711 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 FAM155BO75949 473 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 POLR2JP52435 117 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 WSCD2Q2TBF2 565 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 LINGO2Q7L985 606 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SLC22A16Q86VW1 577 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CPSF7Q8N684 471 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PNPT1Q8TCS8 783 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 TSEN15Q8WW01 171 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 FATE1Q969F0 183 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CENPNQ96H22 339 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ZCCHC2Q9C0B9 1178 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 POLR1EQ9GZS1 481 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 EXO5Q9H790 373 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 MAFFQ9ULX9 164 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PDLIM1O00151 329 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 WRBO00258 174 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 TNFRSF11BO00300 401 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PAEPP09466 180 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CRHR1P34998 444 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 GSCP56915 257 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 RPL6Q02878 288 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 BCL2L1Q07817 233 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 LAMTOR4Q0VGL1 99 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SEMA5AQ13591 1074 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 IDNKQ5T6J7 187 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 AKAP1Q92667 903 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PPM1MQ96MI6 270 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ZSCAN5AQ9BUG6 496 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF70Q9UC06 446 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 M0R036 132 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 TRAFD1O14545 582 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ENTPD3O75355 529 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 VARSP26640 1264 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 FCGRTP55899 365 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SNAPC2Q13487 334 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 NADK2Q4G0N4 442 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 MIIPQ5JXC2 388 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ARMC12Q5T9G4 340 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF662Q6ZS27 426 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 IQCKQ8N0W5 287 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 LEMD2Q8NC56 503 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 FAIM2Q9BWQ8 316 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 C12orf65Q9H3J6 166 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 XKR8Q9H6D3 395 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 MKLN1Q9UL63 735 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ALG5Q9Y673 324 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 H6PDO95479 791 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CYP2A6P11509 494 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 RPL3P39023 403 aaKnown RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 PRKCIP41743 596 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 RORCP51449 518 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 BRSK2Q8IWQ3 736 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 RGL4Q8IZJ4 473 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 MUC13Q9H3R2 512 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL4A6-201ENST00000334504 SNCAIPQ9Y6H5 919 aa9.79□□□□□ -0.84
COL4A6-201ENST00000334504 MAGEB3O15480 346 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 IGSF6O95976 241 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ITGB1P05556 798 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ALDH7A1P49419 539 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CDH13P55290 713 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 HSPA14Q0VDF9 509 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 VPS26BQ4G0F5 336 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 C4orf19Q8IY42 314 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PEX5LQ8IYB4 626 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CKLFQ9UBR5 152 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RAB23Q9ULC3 237 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 JCADQ9P266 1359 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SIGLEC16A6NMB1 481 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ZW10O43264 779 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 THP07101 528 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 GNAO1P09471 354 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SMARCB1Q12824 385 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SLC2A14Q8TDB8 520 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 TBC1D17Q9HA65 648 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 TNS3Q68CZ2 1445 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 hCG_1818297A0A087WSY0 165 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 EPHB6O15197 1021 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PQBP1O60828 265 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 THPOP40225 353 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PCDH1Q08174 1060 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 BNIP3Q12983 259 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF267Q14586 743 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PTGES3Q15185 160 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 NIPAL1Q6NVV3 410 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms