RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DCDC1P59894 354 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 RPS14P62263 151 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 SATB1Q01826 763 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CST6Q15828 149 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 SEPT7Q16181 437 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CRY1Q16526 586 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 PDPK2PQ6A1A2 396 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 KIAA0930Q6ICG6 404 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CYP2U1Q7Z449 544 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MPP5Q8N3R9 675 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CHST14Q8NCH0 376 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MZB1Q8WU39 189 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ALKBH8Q96BT7 664 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 THOC1Q96FV9 657 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 KLHL32Q96NJ5 620 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 NLE1Q9NVX2 485 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ZC3H7BQ9UGR2 993 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CHMP2BQ9UQN3 213 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 NCKAP1Q9Y2A7 1128 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF106Q9H2Y7 1883 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 AREL1O15033 823 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TM9SF1O15321 606 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ATP5HO75947 161 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 UGT2B4P06133 528 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CTSLP07711 333 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 XPAP23025 273 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TARSP26639 723 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 COPAP53621 1224 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MTM1Q13496 603 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CDKN3Q16667 212 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TSTD2Q5T7W7 516 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 BMP8AQ7Z5Y6 402 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 SIX5Q8N196 739 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TXNDC5Q8NBS9 432 aaKnown RBP9.49□□□□□ -0.89
C11orf54-201ENST00000331239 LPCAT1Q8NF37 534 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 GSDMBQ8TAX9 411 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 DCAKDQ8WVC6 231 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 C10orf82Q8WW14 230 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 EXOC2Q96KP1 924 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 NSMCE3Q96MG7 304 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 LRRC37BQ96QE4 947 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CYTH2Q99418 400 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 SGK2Q9HBY8 427 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 PREBQ9HCU5 417 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TREX1Q9NSU2 369 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 EBF1Q9UH73 591 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 CA14Q9ULX7 337 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 TRIM33Q9UPN9 1127 aa9.49□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF217O75362 1048 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PPARGP37231 505 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ELK3P41970 407 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 POLD2P49005 469 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PCSK7Q16549 785 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 LYPLAL1Q5VWZ2 237 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 NAIF1Q69YI7 327 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 KIAA0408Q6ZU52 694 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 OTOAQ7RTW8 1153 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 TTC30BQ8N4P2 665 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ST13P5Q8NFI4 369 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 GPR150Q8NGU9 434 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 RPLP0P6Q8NHW5 317 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 FAM174AQ8TBP5 190 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 AGAP11Q8TF27 550 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF75CPQ92670 426 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PLEKHG4BQ96PX9 1271 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 TCF12Q99081 682 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 LRMDAQ9H2I8 198 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 MOCS1Q9NZB8 636 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 UBP1Q9NZI7 540 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 APPL1Q9UKG1 709 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 STK38LQ9Y2H1 464 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 SIT1Q9Y3P8 196 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PLXND1Q9Y4D7 1925 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 STK25O00506 426 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 TOR1BO14657 336 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PFDN6O15212 129 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 LDB2O43679 373 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PIAS1O75925 651 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 DNTTP04053 509 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 MGAT1P26572 445 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 CCR3P51677 355 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF140P52738 457 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ANKRD20A4Q4UJ75 823 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 KIAA1161Q6NSJ0 714 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 FBXL19Q6PCT2 694 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 TRIM67Q6ZTA4 783 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 RASSF3Q86WH2 238 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 BANPQ8N9N5 519 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 GIMAP7Q8NHV1 300 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 HEXDCQ8WVB3 486 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms