RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CCNIQ14094 377 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 GK3PQ14409 553 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 INSCQ1MX18 579 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 SFT2D3Q587I9 215 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PTRHD1Q6GMV3 140 aaKnown RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 KIAA0930Q6ICG6 404 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 KDM1BQ8NB78 822 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 LINGO1Q96FE5 620 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PIDD1Q9HB75 910 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 SNX13Q9Y5W8 968 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 NRG2O14511 850 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PSMD3O43242 534 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 HGFP14210 728 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 HOXD9P28356 352 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PPARGP37231 505 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 KLC1Q07866 573 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 TRAF2Q12933 501 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PPP1R8Q12972 351 aaKnown RBP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 FAM126BQ8IXS8 530 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.63□□□□□ -0.71
CUL4A-201ENST00000326335 ARHGAP18Q8N392 663 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■■□□ 17
CUL4A-201ENST00000326335 GPR78Q96P69 363 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 CFAP97Q9P2B7 532 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 SEPT3Q9UH03 358 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PCDHGB4Q9UN71 923 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 PCDHGB5Q9Y5G0 923 aa10.63□□□□□ -0.71
CUL4A-201ENST00000326335 OR6C75A6NL08 312 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 C2orf81A6NN90 581 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 E7ENX8 843 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 SYN3O14994 580 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 PER2O15055 1255 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 AOC1P19801 751 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 EFNA1P20827 205 aaPredicted RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 RPL10P27635 214 aaKnown RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ACTR3P61158 418 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 POU4F1Q01851 419 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CEACAM7Q14002 265 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 RNF111Q6ZNA4 994 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ISCA2Q86U28 154 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 MIER2Q8N344 545 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 FBXO39Q8N4B4 442 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CALML6Q8TD86 181 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 GFM2Q969S9 779 aaKnown RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ASIC4Q96FT7 647 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZNF333Q96JL9 665 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 MRPL1Q9BYD6 325 aaKnown RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 VPS45Q9NRW7 570 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 SLC30A1Q9Y6M5 507 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 SLC4A7Q9Y6M7 1214 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 GREB1Q4ZG55 1949 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZNF839A8K0R7 811 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 PSMD12O00232 456 aaPredicted RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 SDHDO14521 159 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 KIF3CO14782 793 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 INPPL1O15357 1258 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 PRAMEF11O60813 436 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CLASP2O75122 1294 aaKnown RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CLDN7O95471 211 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 URODP06132 367 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 THRAP10827 490 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 NCK1P16333 377 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 NDST2P52849 883 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 STX1BP61266 288 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TRMT5Q32P41 509 aaKnown RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZNF648Q5T619 568 aaPredicted RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TLDC1Q6P9B6 456 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TSPAN33Q86UF1 283 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CEP70Q8NHQ1 597 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 LRGUKQ96M69 825 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZNF184Q99676 751 aaPredicted RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZFP14Q9HCL3 533 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 ZNF334Q9HCZ1 680 aaPredicted RBP10.62□□□□□ -0.71
CUL4A-201ENST00000326335 RGSL1A5PLK6 1076 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 SLC7A2P52569 658 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 IL10RBQ08334 325 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TECRLQ5HYJ1 363 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 BBS7Q8IWZ6 715 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 OR10Q1Q8NGQ4 319 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 PYCR2Q96C36 320 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TSPAN18Q96SJ8 248 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 CLIC5Q9NZA1 410 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 USP22Q9UPT9 525 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 TRPM7Q96QT4 1865 aa10.62□□□□□ -0.71
CUL4A-201ENST00000326335 LAMA1P25391 3075 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 TRAFD1O14545 582 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-201ENST00000326335 NTHL1P78549 312 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 CDC16Q13042 620 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 NAB1Q13506 487 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 IKBKEQ14164 716 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 C6orf10Q5SRN2 563 aa10.61□□□□□ -0.71
CUL4A-201ENST00000326335 RAB44Q7Z6P3 723 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms