RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DEF6Q9H4E7 631 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 AGO1Q9UL18 857 aaKnown RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 STRIP2Q9ULQ0 834 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 SNX12Q9UMY4 172 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CCDC66A2RUB6 948 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 IDSB3KWA1 339 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 GABBR2O75899 941 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 RASGRP1O95267 797 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 H2AFZP0C0S5 128 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CCNYL3P0C7X3 344 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 IDSP22304 550 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 PPARDQ03181 441 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 GABPB1Q06547 395 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CHAF1BQ13112 559 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 GLE1Q53GS7 698 aaKnown RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 PIP5KL1Q5T9C9 394 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 H2AFVQ71UI9 128 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 PHF13Q86YI8 300 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 MNS1Q8NEH6 495 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 TAS1R2Q8TE23 839 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 SAAL1Q96ER3 474 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 EEF2KMTQ96G04 330 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 PBKQ96KB5 322 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 TRAPPC9Q96Q05 1148 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 NUDT22Q9BRQ3 303 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 TCEAL2Q9H3H9 227 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 GPAMQ9HCL2 828 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 UBE2TQ9NPD8 197 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 NLRC4Q9NPP4 1024 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 RAB21Q9UL25 225 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 AGRPO00253 132 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 SPINT1O43278 529 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 IGHEP01854 428 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 RARAP10276 462 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CYP11B1P15538 503 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CTNNA2P26232 953 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CD1CP29017 333 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 RPL34P49207 117 aaKnown RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 SLC5A3P53794 718 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 RPS21P63220 83 aaKnown RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 FMO1Q01740 532 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 STILQ15468 1287 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 INAQ16352 499 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 ZNF569Q5MCW4 686 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 DMRTC2Q8IXT2 367 aaPredicted RBP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 MMGT1Q8N4V1 131 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.66□□□□□ -1.34
CSTF3-201ENST00000323959 HES6Q96HZ4 224 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 ANKRD36BP1Q96IX9 119 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 CRACR2AQ9BSW2 395 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 OLAHQ9NV23 265 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 STOML2Q9UJZ1 356 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM59LQ9UK28 342 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 SCML2Q9UQR0 700 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 PLEKHA6Q9Y2H5 1048 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 HYOU1Q9Y4L1 999 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 SAR1BQ9Y6B6 198 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 LRP4O75096 1905 aa6.66□□□□□ -1.34
CSTF3-201ENST00000323959 MIF4GDA9UHW6 222 aaKnown RBP6.65□□□□□ -1.34
CSTF3-201ENST00000323959 ATE1O95260 518 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 CTSEP14091 401 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 CSKP41240 450 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 FAAH2Q6GMR7 532 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 ACAD10Q6JQN1 1059 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 WDR93Q6P2C0 686 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM71Q6P5X7 295 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 CREBRFQ8IUR6 639 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 ACTRT1Q8TDG2 376 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 CT55Q8WUE5 264 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 NACC2Q96BF6 587 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 SLC17A9Q9BYT1 436 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 NIF3L1Q9GZT8 377 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 ACTL8Q9H568 366 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 POLD4Q9HCU8 107 aa6.65□□□□□ -1.34
CSTF3-201ENST00000323959 DMAP1Q9NPF5 467 aaPredicted RBP6.65□□□□□ -1.34
CSTF3-201ENST00000323959 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
CSTF3-201ENST00000323959 ZFR2Q9UPR6 939 aaKnown RBP6.65□□□□□ -1.34
CSTF3-201ENST00000323959 POM121BA6NF01 834 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 TNNC2P02585 160 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 H2AFXP16104 143 aaPredicted RBP6.65□□□□□ -1.35
CSTF3-201ENST00000323959 MCM3P25205 808 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 PTPN4P29074 926 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 SCNN1AP37088 669 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 PTGIRP43119 386 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 ASPAP45381 313 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 TDGF1P3P51864 188 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 NDST2P52849 883 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 WNT7BP56706 349 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 PSMC1P62191 440 aaKnown RBP6.65□□□□□ -1.35
CSTF3-201ENST00000323959 NCOA4Q13772 614 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 PPP2R5EQ16537 467 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 TDRD12Q587J7 1177 aaKnown RBP6.65□□□□□ -1.35
CSTF3-201ENST00000323959 MDH1BQ5I0G3 518 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 RNF219Q5W0B1 726 aaPredicted RBP6.65□□□□□ -1.35
CSTF3-201ENST00000323959 ZNF324BQ6AW86 544 aaPredicted RBP6.65□□□□□ -1.35
CSTF3-201ENST00000323959 ARCQ7LC44 396 aa6.65□□□□□ -1.35
CSTF3-201ENST00000323959 PPM1NQ8N819 430 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms