RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CTNNB1P35222 781 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 GALK1P51570 392 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF135P52742 658 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CDKN2DP55273 166 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CDKL1Q00532 357 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 IL10RBQ08334 325 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 TMED1Q13445 227 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 PDCD2Q16342 344 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 PARP15Q460N3 678 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 TMCO4Q5TGY1 634 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 FBXO46Q6PJ61 603 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 DDX53Q86TM3 631 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CPNE9Q8IYJ1 553 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF366Q8N895 744 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 KREMEN2Q8NCW0 462 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ICA1LQ8NDH6 482 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 OR4K2Q8NGD2 314 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ZFAND2BQ8WV99 257 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 SORCS1Q8WY21 1168 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CDRT15Q96T59 188 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 FEM1AQ9BSK4 669 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 KLF16Q9BXK1 252 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 IL21Q9HBE4 155 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 SARS2Q9NP81 518 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 GMPR2Q9P2T1 348 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 XPR1Q9UBH6 696 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 PTPRDP23468 1912 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 LAMA1P25391 3075 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 COL4A6Q14031 1691 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 TMCC1O94876 653 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CD160O95971 181 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 GOT2P00505 430 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CCDC166P0CW27 439 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 SMIM18P0DKX4 95 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 LAG3P18627 525 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 KCNC1P48547 511 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 SLC12A2P55011 1212 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 GSTA3Q16772 222 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 LAYNQ6UX15 382 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 DNAJC14Q6Y2X3 702 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CENPLQ8N0S6 344 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 MDGA1Q8NFP4 955 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 FAM110BQ8TC76 370 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ESAMQ96AP7 390 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 RCN3Q96D15 328 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 ZSWIM3Q96MP5 696 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 MTG2Q9H4K7 406 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 SCUBE2Q9NQ36 999 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 TREX1Q9NSU2 369 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 DCDC2Q9UHG0 476 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 LZTS1Q9Y250 596 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 TDRKHQ9Y2W6 561 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 NYNRINQ9P2P1 1898 aaKnown RBP7.61□□□□□ -1.19
TRIM55-202ENST00000315962 VPS13AQ96RL7 3174 aa7.61□□□□□ -1.19
TRIM55-202ENST00000315962 CCDC162PA2VCL2 907 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 ANTXRLA6NF34 631 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 NCF1BA6NI72 391 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 NCF1CA8MVU1 366 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 WASH4PA8MWX3 477 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TMX2-CTNND1H3BSU7 103 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 KLF11O14901 512 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 GLRA3O75311 464 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 COX4I1P13073 169 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 NCF1P14598 390 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 EPCAMP16422 314 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 STMN1P16949 149 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 AOC1P19801 751 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 KCNA5P22460 613 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 CD70P32970 193 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 SERPINB8P50452 374 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 CDH4P55283 916 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 MS4A2Q01362 244 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 SMARCB1Q12824 385 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TSTD2Q5T7W7 516 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 GPR158Q5T848 1215 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 POTEHQ6S545 545 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TMEM25Q86YD3 366 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TDRD5Q8NAT2 981 aaKnown RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 BHLHE22Q8NFJ8 381 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 FAM81AQ8TBF8 368 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 C2orf15Q8WU43 125 aaKnown RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 HEXDCQ8WVB3 486 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 POF1BQ8WVV4 589 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TMIGD2Q96BF3 282 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 NPAS2Q99743 824 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 ACE2Q9BYF1 805 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 PDFQ9HBH1 243 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 GPAMQ9HCL2 828 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 GALPQ9UBC7 116 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 EVLQ9UI08 416 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-202ENST00000315962 SSX2IPQ9Y2D8 614 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 A0A1B0GVM2 712 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 HEATR9A2RTY3 570 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 TCAF2A6NFQ2 919 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 G3V2L1 256 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 CLDN11O75508 207 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 CRTAMO95727 393 aa7.6□□□□□ -1.19
TRIM55-202ENST00000315962 CLPTM1O96005 669 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms