RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 OR51F1A6NGY5 319 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 H0Y858 1186 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 PSMD11O00231 422 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 AP1G1O43747 822 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 ELFN1P0C7U0 828 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 ACADMP11310 421 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 BPIP17213 487 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 SFSWAPQ12872 951 aaKnown RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 NAB1Q13506 487 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 TEDDM1Q5T9Z0 273 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 NEPROQ6NW34 567 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 LIPIQ6XZB0 460 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 HSD11B1LQ7Z5J1 315 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 PTAR1Q7Z6K3 402 aaPredicted RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 LRRC6Q86X45 466 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 OTUD6BQ8N6M0 293 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 EPS8L3Q8TE67 593 aaKnown RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 HMGB4Q8WW32 186 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 EDAQ92838 391 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 MRRFQ96E11 262 aaKnown RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 FAM167BQ9BTA0 163 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 WRAP53Q9BUR4 548 aaKnown RBP16.09■□□□□ 0.17
TUBB3-201ENST00000315491 PPCSQ9HAB8 311 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 C2orf42Q9NWW7 574 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 SLC17A6Q9P2U8 582 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 SLC24A2Q9UI40 661 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 MCM8Q9UJA3 840 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 SIT1Q9Y3P8 196 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 COL6A3P12111 3177 aa16.09■□□□□ 0.17
TUBB3-201ENST00000315491 SMIM23A6NLE4 172 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 RASGRF2O14827 1237 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 GCAP28676 217 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 MC4RP32245 332 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 SPAM1P38567 509 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 MSH2P43246 934 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 SLCO1A2P46721 670 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 RPS9P46781 194 aaKnown RBP16.08■□□□□ 0.17
TUBB3-201ENST00000315491 SPINT3P49223 89 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 TAS2R38P59533 333 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 XIAPP98170 497 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 PEX6Q13608 980 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 KRT71Q3SY84 523 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 USP30Q70CQ3 517 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 KBTBD6Q86V97 674 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 CNTN4Q8IWV2 1026 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 TSTD1Q8NFU3 115 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 OR4L1Q8NH43 312 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 GIMAP7Q8NHV1 300 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 CALML6Q8TD86 181 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 CXorf40AQ8TE69 158 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 SLC44A1Q8WWI5 657 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.17
TUBB3-201ENST00000315491 PAFAH2Q99487 392 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 AGAP2Q99490 1192 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 DHRS4Q9BTZ2 278 aa16.08■□□□□ 0.17
TUBB3-201ENST00000315491 FNDC3AQ9Y2H6 1198 aaKnown RBP16.08■□□□□ 0.17
TUBB3-201ENST00000315491 TLDC2A0PJX2 215 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 TSPAN6O43657 245 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 UGT1A9O60656 530 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 PTPN5P54829 565 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 ZDHHC20Q5W0Z9 365 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 RFLNAQ6ZTI6 216 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 CROCCP2Q86T23 111 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 LMNTD2Q8IXW0 634 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 PGBD3Q8N328 593 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 SPEM1Q8N4L4 309 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 GPR26Q8NDV2 337 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 GABPB2Q8TAK5 448 aaPredicted RBP16.08■□□□□ 0.16
TUBB3-201ENST00000315491 SGSM3Q96HU1 749 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 UGT1A7Q9HAW7 530 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 UGT1A10Q9HAW8 530 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 UGT1A8Q9HAW9 530 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 CATSPERZQ9NTU4 200 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 BCCIPQ9P287 314 aaKnown RBP eCLIP16.08■□□□□ 0.16
TUBB3-201ENST00000315491 APPL1Q9UKG1 709 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 FZD4Q9ULV1 537 aa16.08■□□□□ 0.16
TUBB3-201ENST00000315491 GLYATL1P3A0A0U1RQE8 302 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 DCXO43602 365 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 PLRG1O43660 514 aaKnown RBP16.07■□□□□ 0.16
TUBB3-201ENST00000315491 MMP20O60882 483 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 DCNP07585 359 aaKnown RBP16.07■□□□□ 0.16
TUBB3-201ENST00000315491 INHBAP08476 426 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 ACOX1Q15067 660 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 FASTKD1Q53R41 847 aaKnown RBP16.07■□□□□ 0.16
TUBB3-201ENST00000315491 WLSQ5T9L3 541 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 ZNF470Q6ECI4 717 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 FAM151BQ6UXP7 276 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 TECPR1Q7Z6L1 1165 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 SLC26A11Q86WA9 606 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 TDRPQ86YL5 185 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 RAVER1Q8IY67 606 aaKnown RBP16.07■□□□□ 0.16
TUBB3-201ENST00000315491 COQ10AQ96MF6 247 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 PLEKHG4BQ96PX9 1271 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 HHIPQ96QV1 700 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 IL26Q9NPH9 171 aa16.07■□□□□ 0.16
TUBB3-201ENST00000315491 RAD18Q9NS91 495 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms