RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PTP4A2Q12974 167 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNI2Q6ZMN8 369 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF621Q6ZSS3 439 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 EFCAB3Q8N7B9 438 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 STYXQ8WUJ0 223 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ELMO1Q92556 727 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PRCCQ92733 491 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FCRL2Q96LA5 508 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM111AQ96PZ2 611 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 COPS8Q99627 209 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 TMEM121Q9BTD3 319 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 C1QTNF1Q9BXJ1 281 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM192AQ9GZU8 254 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 REEP1Q9H902 201 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC2A4RGQ9NR83 387 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CLDND1Q9NY35 253 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 COL20A1Q9P218 1284 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CKLFQ9UBR5 152 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ANGPT4Q9Y264 503 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ARID1BQ8NFD5 2236 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCL16O15467 120 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 KLHL41O60662 606 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FGF18O76093 207 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 IPO13O94829 963 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 NUDT1P36639 197 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 MZT2BQ6NZ67 158 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC39A5Q6ZMH5 540 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM136AQ96C01 138 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 C8orf48Q96LL4 319 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 TCF12Q99081 682 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 IFNGP01579 166 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PIM1P11309 404 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ATP5F1P24539 256 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 KLK7P49862 253 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 NRLP54845 237 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 IL10RBQ08334 325 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 NEPROQ6NW34 567 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ZCCHC9Q8N567 271 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 C4orf32Q8N8J7 132 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 RDH11Q8TC12 318 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PCYOX1Q9UHG3 505 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 EDDM13A0A1B0GTR0 161 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CPA3P15088 417 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PSMB9P28065 219 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CCND3P30281 292 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 OMPP47874 163 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 NME5P56597 212 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SP2Q02086 613 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 GALNT3Q14435 633 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 AGKQ53H12 422 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 XKR4Q5GH76 650 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 WDR45BQ5MNZ6 344 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 RAP1GAP2Q684P5 730 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 EIF3MQ7L2H7 374 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 TRMOQ9BU70 441 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 TMEM120AQ9BXJ8 343 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 RBM12Q9NTZ6 932 aaKnown RBP8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 KLF15Q9UIH9 416 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 PHF24Q9UPV7 400 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC38A8A6NNN8 435 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ADRA1BP35368 520 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 CAP1Q01518 475 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 DMTNQ08495 405 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ORC1Q13415 861 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 GPAT3Q53EU6 434 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 MORN1Q5T089 497 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 ADGRF1Q5T601 910 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 OAFQ86UD1 273 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 MSANTD3Q96H12 275 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 LRRC1Q9BTT6 524 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
PCDHB1-201ENST00000306549 RAD51CO43502 376 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ADRB2P07550 413 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 TFPIP10646 304 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNCP24863 283 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ILF3Q12906 894 aaKnown RBP eCLIP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 AP5B1Q2VPB7 878 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 TMC8Q8IU68 726 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 FLCNQ8NFG4 579 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 TSTD1Q8NFU3 115 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RORBQ92753 470 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 NTAN1Q96AB6 310 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 RPS6KA6Q9UK32 745 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 COQ4Q9Y3A0 265 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 C1orf232A0A0U1RR37 186 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 KCNU1A8MYU2 1149 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 KLRC4O43908 158 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 SEMA3DO95025 777 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ADH1BP00325 375 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNFP41002 786 aa8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 LSM12Q3MHD2 195 aaKnown RBP8.31□□□□□ -1.08
PCDHB1-201ENST00000306549 ZBTB49Q6ZSB9 765 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms