RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 PRAMEF10O60809 474 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 ECEL1O95672 775 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 TEAD1P28347 426 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 ALDH4A1P30038 563 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 GARSP41250 739 aaKnown RBP20.44■□□□□ 0.86
RER1-201ENST00000306256 ARSEP51690 589 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 MAPK10P53779 464 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 CTBSQ01459 385 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 GALNT2Q10471 571 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 DPYSL3Q14195 570 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 C16orf72Q14CZ0 275 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 CCDC122Q5T0U0 273 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 NCBP2-AS2Q69YL0 99 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 ALKBH5Q6P6C2 394 aaKnown RBP20.44■□□□□ 0.86
RER1-201ENST00000306256 ZNF564Q8TBZ8 553 aaPredicted RBP20.44■□□□□ 0.86
RER1-201ENST00000306256 FAM71BQ8TC56 605 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 SCAMP4Q969E2 229 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 NUDT22Q9BRQ3 303 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
RER1-201ENST00000306256 ABCG8Q9H221 673 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 FOXJ2Q9P0K8 574 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 ACSL6Q9UKU0 697 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 CAPN11Q9UMQ6 739 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 SLC17A4Q9Y2C5 497 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 TMEM98Q9Y2Y6 226 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 PPIL1Q9Y3C6 166 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 TTLL3Q9Y4R7 772 aa20.44■□□□□ 0.86
RER1-201ENST00000306256 NVLO15381 856 aaKnown RBP20.43■□□□□ 0.86
RER1-201ENST00000306256 FZD6O60353 706 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 IVLP07476 585 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 KRT10P13645 584 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 ADCY8P40145 1251 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 TPM4P67936 248 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 DPTQ07507 201 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 HADHQ16836 314 aaKnown RBP20.43■□□□□ 0.86
RER1-201ENST00000306256 USP53Q70EK8 1073 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 ZNF438Q7Z4V0 828 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 ZFAND4Q86XD8 727 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 USP7Q93009 1102 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 AP2M1Q96CW1 435 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 CMKLR1Q99788 373 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 CHKBQ9Y259 395 aa20.43■□□□□ 0.86
RER1-201ENST00000306256 A0A0J9YYE9 177 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 CPNE6O95741 557 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 TRBC1P01850 177 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 GYPCP04921 128 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 EPHB1P54762 984 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 BIRC2Q13490 618 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 PAFAH1B3Q15102 231 aaKnown RBP20.42■□□□□ 0.86
RER1-201ENST00000306256 MARK2Q7KZI7 788 aaKnown RBP20.42■□□□□ 0.86
RER1-201ENST00000306256 PIM3Q86V86 326 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 LRRC49Q8IUZ0 686 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 NAGSQ8N159 534 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 NDUFAF2Q8N183 169 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 MAML1Q92585 1016 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 TMEM159Q96B96 161 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 OR2M4Q96R27 311 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 AGAP2Q99490 1192 aa20.42■□□□□ 0.86
RER1-201ENST00000306256 RBM22Q9NW64 420 aaKnown RBP eCLIP20.42■□□□□ 0.862e-8■□□□□ 8.6
RER1-201ENST00000306256 LUC7L2Q9Y383 392 aaKnown RBP20.42■□□□□ 0.86
RER1-201ENST00000306256 LIPCP11150 499 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ACTR1BP42025 376 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 TAS2R40P59535 323 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ACTR1AP61163 376 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 PTSQ03393 145 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 NR1D2Q14995 579 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ANKRD20A8PQ5CZ79 823 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ALG1LQ6GMV1 187 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ADAMTSL4Q6UY14 1074 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 ZNF574Q6ZN55 896 aaPredicted RBP20.41■□□□□ 0.86
RER1-201ENST00000306256 VASH2Q86V25 355 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 KCTD6Q8NC69 237 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 RCBTB1Q8NDN9 531 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 TDRD1Q9BXT4 1180 aaKnown RBP20.41■□□□□ 0.86
RER1-201ENST00000306256 CDH19Q9H159 772 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 IFNKQ9P0W0 207 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 CTTNBP2NLQ9P2B4 639 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 NENFQ9UMX5 172 aa20.41■□□□□ 0.86
RER1-201ENST00000306256 CAPN8A6NHC0 703 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 C9orf172C9J069 976 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 MATN3O15232 486 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 PPM1DO15297 605 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 INPP4BO15327 924 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 PRLP01236 227 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 HLA-DQB2P05538 268 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 CCL4P13236 92 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 STC1P52823 247 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 GBE1Q04446 702 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 NIPAL4Q0D2K0 466 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 IFI16Q16666 785 aaKnown RBP20.4■□□□□ 0.86
RER1-201ENST00000306256 NKAIN2Q5VXU1 208 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 TIGD7Q6NT04 549 aaPredicted RBP20.4■□□□□ 0.86
RER1-201ENST00000306256 ARRDC2Q8TBH0 407 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 SCARF2Q96GP6 870 aaPredicted RBP20.4■□□□□ 0.86
RER1-201ENST00000306256 CCDC74BQ96LY2 380 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 ZNF670Q9BS34 389 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 RIOK2Q9BVS4 552 aaKnown RBP20.4■□□□□ 0.86
RER1-201ENST00000306256 PACSIN1Q9BY11 444 aa20.4■□□□□ 0.86
RER1-201ENST00000306256 IGHV5-10-1A0A0J9YXX1 117 aa20.39■□□□□ 0.85
RER1-201ENST00000306256 PROSCO94903 275 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms