RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 AP2M1Q96CW1 435 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 SMIM14Q96QK8 99 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 NUDT22Q9BRQ3 303 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 POLR1EQ9GZS1 481 aaKnown RBP19.55■□□□□ 0.72
CXCL3-201ENST00000296026 ABCG8Q9H221 673 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 FOXJ2Q9P0K8 574 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 AKAP7Q9P0M2 348 aaPredicted RBP19.55■□□□□ 0.72
CXCL3-201ENST00000296026 ZNF462Q96JM2 2506 aa19.55■□□□□ 0.72
CXCL3-201ENST00000296026 A0A087X0T9 212 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 C9orf172C9J069 976 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 MYO1FO00160 1098 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 ZW10O43264 779 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 MFSD11O43934 449 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 FZD6O60353 706 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 SOD1P00441 154 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 SERPING1P05155 500 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 CYP1A2P05177 515 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 FAM228BP0C875 321 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 GARSP41250 739 aaKnown RBP19.54■□□□□ 0.72
CXCL3-201ENST00000296026 PEX6Q13608 980 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 NFKBIBQ15653 356 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 CCDC122Q5T0U0 273 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 ZNF574Q6ZN55 896 aaPredicted RBP19.54■□□□□ 0.72
CXCL3-201ENST00000296026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.54■□□□□ 0.72
CXCL3-201ENST00000296026 FAM71BQ8TC56 605 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 SCAMP4Q969E2 229 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 SGF29Q96ES7 293 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 FUCA2Q9BTY2 467 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 CDH19Q9H159 772 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 TMEM98Q9Y2Y6 226 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 PLEKHM1Q9Y4G2 1056 aa19.54■□□□□ 0.72
CXCL3-201ENST00000296026 A0A0J9YYE9 177 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 TRBC1P01850 177 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 ZNF30P17039 623 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 CD1CP29017 333 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 PBX1P40424 430 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 ACTR1BP42025 376 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 GPR3P46089 330 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 EPHB1P54762 984 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 ACTR1AP61163 376 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 FANCCQ00597 558 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 DSC2Q02487 901 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 PTSQ03393 145 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 GALNT2Q10471 571 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 CLPPQ16740 277 aaPredicted RBP19.53■□□□□ 0.72
CXCL3-201ENST00000296026 HADHQ16836 314 aaKnown RBP19.53■□□□□ 0.72
CXCL3-201ENST00000296026 MANEAQ5SRI9 462 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 TMEM164Q5U3C3 297 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 NCBP2-AS2Q69YL0 99 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 ADAMTSL4Q6UY14 1074 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 TRIM74Q86UV6 250 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 VASH2Q86V25 355 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 RCBTB1Q8NDN9 531 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 CPLX3Q8WVH0 158 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 SCARF2Q96GP6 870 aaPredicted RBP19.53■□□□□ 0.72
CXCL3-201ENST00000296026 OR2M4Q96R27 311 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 PCDHB11Q9Y5F2 797 aa19.53■□□□□ 0.72
CXCL3-201ENST00000296026 COL6A6A6NMZ7 2263 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 IGHV5-10-1A0A0J9YXX1 117 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 PPM1DO15297 605 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 MAP3K6O95382 1288 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 CCL4P13236 92 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 CD82P27701 267 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 GJC1P36383 396 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 ARSEP51690 589 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 ZBED6P86452 979 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 DPYSL3Q14195 570 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 IHHQ14623 411 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 PAFAH1B3Q15102 231 aaKnown RBP19.52■□□□□ 0.72
CXCL3-201ENST00000296026 ATP13A4Q4VNC1 1196 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 ALG1LQ6GMV1 187 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 TIGD7Q6NT04 549 aaPredicted RBP19.52■□□□□ 0.72
CXCL3-201ENST00000296026 ALKBH5Q6P6C2 394 aaKnown RBP19.52■□□□□ 0.72
CXCL3-201ENST00000296026 MARK2Q7KZI7 788 aaKnown RBP19.52■□□□□ 0.72
CXCL3-201ENST00000296026 DTX1Q86Y01 620 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 EXD3Q8N9H8 876 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 MAML1Q92585 1016 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 CCDC74BQ96LY2 380 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 AGAP2Q99490 1192 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 B3GNT4Q9C0J1 378 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 CHKBQ9Y259 395 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 TTLL3Q9Y4R7 772 aa19.52■□□□□ 0.72
CXCL3-201ENST00000296026 HGSO14964 777 aaPredicted RBP19.51■□□□□ 0.71
CXCL3-201ENST00000296026 MATN3O15232 486 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 CES1P23141 567 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 LIMK2P53671 638 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 UBASH3AP57075 661 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 TPM4P67936 248 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 IFI16Q16666 785 aaKnown RBP19.51■□□□□ 0.71
CXCL3-201ENST00000296026 LINC00303Q3SY05 128 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 PYCR3Q53H96 274 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 NKAIN2Q5VXU1 208 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 ZNF765Q7L2R6 523 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 LUZP1Q86V48 1076 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 NLRP8Q86W28 1048 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 KCTD6Q8NC69 237 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 ZNF564Q8TBZ8 553 aaPredicted RBP19.51■□□□□ 0.71
CXCL3-201ENST00000296026 CBX8Q9HC52 389 aa19.51■□□□□ 0.71
CXCL3-201ENST00000296026 RBM22Q9NW64 420 aaKnown RBP eCLIP19.51■□□□□ 0.71
CXCL3-201ENST00000296026 CAPN11Q9UMQ6 739 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms