RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ADGRE3Q9BY15 652 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 KLHL4Q9C0H6 718 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 UTP6Q9NYH9 597 aaKnown RBP19.93■□□□□ 0.78
CXCL16-201ENST00000293778 MED16Q9Y2X0 877 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 ANKRD36A6QL64 1941 aa19.93■□□□□ 0.78
CXCL16-201ENST00000293778 MYCP01106 439 aaPredicted RBP19.92■□□□□ 0.78
CXCL16-201ENST00000293778 GFAPP14136 432 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 ARHGEF6Q15052 776 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 AGKQ53H12 422 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 TPGS2Q68CL5 300 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 LINGO4Q6UY18 593 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 PDSS2Q86YH6 399 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 RNF148Q8N7C7 305 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 C19orf60Q96EN9 201 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 TRMT2BQ96GJ1 504 aaKnown RBP19.92■□□□□ 0.78
CXCL16-201ENST00000293778 DERL2Q9GZP9 239 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 SMPD4Q9NXE4 827 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 TANC1Q9C0D5 1861 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 FKTNO75072 461 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 TMCC1O94876 653 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 CDK14O94921 469 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 MT-CO1P00395 513 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 C1RP00736 705 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 PEX2P28328 305 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 MSX2P35548 267 aaPredicted RBP19.92■□□□□ 0.78
CXCL16-201ENST00000293778 PRMT2P55345 433 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 SH3BP2P78314 561 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 RAD51Q06609 339 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 PTK2BQ14289 1009 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 VEPH1Q14D04 833 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 TRIP10Q15642 601 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 UGT3A2Q3SY77 523 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 SETMARQ53H47 684 aaPredicted RBP19.92■□□□□ 0.78
CXCL16-201ENST00000293778 LARP4Q71RC2 724 aaKnown RBP eCLIP19.92■□□□□ 0.786e-9■□□□□ 9.8
CXCL16-201ENST00000293778 HERC6Q8IVU3 1022 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 EFHBQ8N7U6 833 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 STAG3L4Q8TBR4 150 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 KIAA1191Q96A73 305 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 VCXQ9H320 206 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 MID1IP1Q9NPA3 183 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 CCDC167Q9P0B6 97 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 PSMD13Q9UNM6 376 aa19.92■□□□□ 0.78
CXCL16-201ENST00000293778 ATP6AP2A0A1C7CYW4 349 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 DPPA5A6NC42 116 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 LRRC14BA6NHZ5 514 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ANKRD66B4E2M5 251 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 CASQ2O14958 399 aaPredicted RBP19.91■□□□□ 0.78
CXCL16-201ENST00000293778 SNAP91O60641 907 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 KERAO60938 352 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ATP6AP2O75787 350 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 SOD2P04179 222 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ATN1P54259 1190 aaPredicted RBP19.91■□□□□ 0.78
CXCL16-201ENST00000293778 MMEL1Q495T6 779 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ZNF296Q8WUU4 475 aaPredicted RBP19.91■□□□□ 0.78
CXCL16-201ENST00000293778 GATA6Q92908 595 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 NR1H4Q96RI1 486 aaPredicted RBP19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ZDHHC7Q9NXF8 308 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 RNF112Q9ULX5 631 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 LCHNA4D1U4 455 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 MAGEA13PA6NCF6 341 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 SUPT3HB4E1H0 165 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 SUPT3HO75486 399 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 CD160O95971 181 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 FGF4P08620 206 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 CDKN1CP49918 316 aaPredicted RBP19.91■□□□□ 0.78
CXCL16-201ENST00000293778 PSME3P61289 254 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 ATP6V0D1P61421 351 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 XIAPP98170 497 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 MS4A2Q01362 244 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 TRAF2Q12933 501 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 PTPRNQ16849 979 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 PPP2R3CQ969Q6 453 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 GPR21Q99679 349 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 DLGAP2Q9P1A6 1054 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 SCOCQ9UIL1 159 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 FKBPLQ9UIM3 349 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 VPS9D1Q9Y2B5 631 aa19.91■□□□□ 0.78
CXCL16-201ENST00000293778 H0Y626 953 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 PPP6CO00743 305 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 MBL2P11226 248 aaPredicted RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 MC4RP32245 332 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 GEN1Q17RS7 908 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 SFT2D3Q587I9 215 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 SPOUT1Q5T280 376 aaKnown RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 REP15Q6BDI9 236 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 PQLC1Q8N2U9 271 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 CARNMT1Q8N4J0 409 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 PCDH20Q8N6Y1 951 aaKnown RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 BHLHE22Q8NFJ8 381 aaPredicted RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 C3orf30Q96M34 536 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 CACNA2D2Q9NY47 1150 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 ADA2Q9NZK5 511 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 C6orf203Q9P0P8 240 aaPredicted RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 PCDHGA7Q9Y5G6 932 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 DNAJC15Q9Y5T4 150 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 OAS3Q9Y6K5 1087 aaKnown RBP19.9■□□□□ 0.78
CXCL16-201ENST00000293778 TRIM38O00635 465 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 AZIN1O14977 448 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 PFDN6O15212 129 aa19.9■□□□□ 0.78
CXCL16-201ENST00000293778 TBL1XO60907 577 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms