RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PAQR3Q6TCH7 311 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 EME1Q96AY2 570 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 BTRCQ9Y297 605 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 MED16Q9Y2X0 877 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 CDKN1CP49918 316 aaPredicted RBP19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 SCNN1BP51168 640 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 SUOXP51687 545 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 RPS24P62847 133 aaKnown RBP19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 ROR2Q01974 943 aaKnown RBP19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 RHDQ02161 417 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 RING1Q06587 406 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 CWF19L1Q69YN2 538 aaKnown RBP19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 FAM110BQ8TC76 370 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 RMDN1Q96DB5 314 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 TUBB1Q9H4B7 451 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 MRGBPQ9NV56 204 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 TMEM181Q9P2C4 612 aa19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 ZFP37Q9Y6Q3 630 aaPredicted RBP19.9■□□□□ 0.78
SCUBE1-201ENST00000290460 A0A0J9YYE9 177 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 OR6C75A6NL08 312 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 AZIN1O14977 448 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 CLASP2O75122 1294 aaKnown RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 NDST3O95803 873 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 EPOP01588 193 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 CAPNS1P04632 268 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 PABPC4LP0CB38 370 aaKnown RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 MYBPC1Q00872 1141 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 GNA12Q03113 381 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 SREBF2Q12772 1141 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 SETMARQ53H47 684 aaPredicted RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 C8orf82Q6P1X6 216 aaPredicted RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 EP400NLQ6ZTU2 488 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 OR4K2Q8NGD2 314 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 PIP4K2CQ8TBX8 421 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 ZBED2Q9BTP6 218 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 SEMA4BQ9NPR2 832 aaPredicted RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 MARCH5Q9NX47 278 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 FNDC3AQ9Y2H6 1198 aaKnown RBP19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 TANC1Q9C0D5 1861 aa19.89■□□□□ 0.77
SCUBE1-201ENST00000290460 SUPT3HB4E1H0 165 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 SUPT3HO75486 399 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 RHOBTB1O94844 696 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 LINC00032P0C843 101 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ZNF26P17031 533 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ATF6P18850 670 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 YBX1P67809 324 aaKnown RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ECT2LQ008S8 904 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 TYSND1Q2T9J0 566 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 VPS26BQ4G0F5 336 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 IYDQ6PHW0 289 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 RAB44Q7Z6P3 723 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 TMEM173Q86WV6 379 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 HERC6Q8IVU3 1022 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ABI1Q8IZP0 508 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 PEX13Q92968 403 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 RNF186Q9NXI6 227 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 GALPQ9UBC7 116 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 SNX13Q9Y5W8 968 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 NCF1BA6NI72 391 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 NCF1CA8MVU1 366 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 NCF1P14598 390 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 OGNP20774 298 aaKnown RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 EEF1DP29692 281 aaKnown RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ACADVLP49748 655 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 ZNF140P52738 457 aaPredicted RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 GPR17Q13304 367 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 PTPRRQ15256 657 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 AMIGO2Q86SJ2 522 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 RNF180Q86T96 592 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 MDGA1Q8NFP4 955 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 CYP2S1Q96SQ9 504 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 MGME1Q9BQP7 344 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 COQ10BQ9H8M1 238 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 MRPL40Q9NQ50 206 aaKnown RBP19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 LZTS1Q9Y250 596 aa19.88■□□□□ 0.77
SCUBE1-201ENST00000290460 A0A0U1RQS6 177 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 C7orf72A4D263 438 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 ATP6V1B1P15313 513 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 CHRM3P20309 590 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 CAPN3P20807 821 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 SLC11A1P49279 550 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 TSNQ15631 228 aaKnown RBP19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 MTX3Q5HYI7 312 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 SAMD4BQ5PRF9 694 aaKnown RBP19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 KANK2Q63ZY3 851 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 PRSS55Q6UWB4 352 aaPredicted RBP19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 TAS1R1Q7RTX1 841 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 GLT6D1Q7Z4J2 308 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 PHYKPLQ8IUZ5 450 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 RHEBL1Q8TAI7 183 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 TUBGCP3Q96CW5 907 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 CINPQ9BW66 212 aaPredicted RBP19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 TFB2MQ9H5Q4 396 aaKnown RBP19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 MAP10Q9P2G4 905 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 RNF112Q9ULX5 631 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 CASP8AP2Q9UKL3 1982 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 ZNF839A8K0R7 811 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 CDC7O00311 574 aa19.87■□□□□ 0.77
SCUBE1-201ENST00000290460 GJB5O95377 273 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms