RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IRAK1BP1Q5VVH5 260 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 USP30Q70CQ3 517 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CNTN4Q8IWV2 1026 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.064e-12■■■■□ 25.3
PTPDC1-201ENST00000288976 RIBC1Q8N443 379 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 STYXQ8WUJ0 223 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CLDN23Q96B33 292 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 SCRN2Q96FV2 425 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ROPN1BQ9BZX4 212 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 EPB41L4BQ9H329 900 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ROPN1Q9HAT0 212 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 AASDHPPTQ9NRN7 309 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ZC3H7BQ9UGR2 993 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF711Q9Y462 761 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 RANBP2P49792 3224 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 C2orf81A6NN90 581 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 H7C0S8 307 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 VIPR1P32241 457 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 DCDC1P59894 354 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TMPRSS15P98073 1019 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 LRRC74AQ0VAA2 488 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 TSTD2Q5T7W7 516 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ERAP2Q6P179 960 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 PPM1NQ8N819 430 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 CHST14Q8NCH0 376 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 FBRSL1Q9HCM7 1045 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-201ENST00000288976 ABCA1O95477 2261 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 MYOFQ9NZM1 2061 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 TMEM247A6NEH6 219 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 C16orf96A6NNT2 1141 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 BAG2O95816 211 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 EPHX1P07099 455 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CHRNB1P11230 501 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 MAP4P27816 1152 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 GRIA1P42261 906 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ZXDAP98168 799 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 GALNT3Q14435 633 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CRYMQ14894 314 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 PDPK2PQ6A1A2 396 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 KLC3Q6P597 504 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 UNC5AQ6ZN44 842 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 SYT13Q7L8C5 426 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM124AQ86V42 546 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 SLC26A11Q86WA9 606 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 TDRPQ86YL5 185 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 NRSN1Q8IZ57 195 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 STK40Q8N2I9 435 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CENPKQ9BS16 269 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 MOCS1Q9NZB8 636 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 NDRG2Q9UN36 371 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 STK38LQ9Y2H1 464 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 PLXND1Q9Y4D7 1925 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 MAP2K7O14733 419 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 NDUFB5O43674 189 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 KLF8O95600 359 aaPredicted RBP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 IGLV3-19P01714 112 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 WASP42768 502 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 NEK3P51956 506 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 LONRF1Q17RB8 773 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF765Q7L2R6 523 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CAMK1DQ8IU85 385 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 SFTPA1Q8IWL2 248 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF614Q8N883 585 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 GPR150Q8NGU9 434 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 PIP4K2CQ8TBX8 421 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ACSS3Q9H6R3 686 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 LRRC4CQ9HCJ2 640 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 PCDHGC4Q9Y5F7 938 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 LDB2O43679 373 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 ADAM23O75077 832 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 AVILO75366 819 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CHEK2O96017 543 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 GPX6P59796 221 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 AGERQ15109 404 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 DBN1Q16643 649 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CHPFQ8IZ52 775 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 GJD3Q8N144 294 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 MPP5Q8N3R9 675 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 SLC24A2Q9UI40 661 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 CHKBQ9Y259 395 aa8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 INTS1Q8N201 2190 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-201ENST00000288976 A0A1W2PQF6 199 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM159BA6NKW6 160 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 RNF40O75150 1001 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 RPP40O75818 363 aaKnown RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 ANP32DO95626 131 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HIST1H2AGP0C0S8 130 aaPredicted RBP8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TIMP2P16035 220 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 HIST1H2ADP20671 130 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 TIE1P35590 1138 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 SOX11P35716 441 aa8.41□□□□□ -1.06
PTPDC1-201ENST00000288976 MMP12P39900 470 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms