RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 GALNT7Q86SF2 657 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 IFNEQ86WN2 208 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 CPNE9Q8IYJ1 553 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 SCML4Q8N228 414 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 SNRNP27Q8WVK2 155 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 ACBD6Q9BR61 282 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 NPLQ9BXD5 320 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 GID8Q9NWU2 228 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 POLG2Q9UHN1 485 aa13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 PTBP2Q9UKA9 531 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-201ENST00000286749 EI24O14681 340 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 INPP4BO15327 924 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 FGF4P08620 206 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 HAPLN1P10915 354 aaPredicted RBP13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 GFAPP14136 432 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 FDXRP22570 491 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 RENBPP51606 427 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 SLC5A3P53794 718 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 TIAL1Q01085 375 aaKnown RBP eCLIP13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 PTPRCAPQ14761 206 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 MARC1Q5VT66 337 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 KANK2Q63ZY3 851 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 SCD5Q86SK9 330 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.291e-7■■■■■ 35.3
SLC28A1-201ENST00000286749 TBATAQ96M53 351 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 NMUR1Q9HB89 426 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 PLGRKTQ9HBL7 147 aa13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-201ENST00000286749 A0A1B0GTL3 188 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 H3BMM5 538 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 ACOX3O15254 700 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 CLOCKO15516 846 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 RASAL1O95294 804 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 SLC2A3P11169 496 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 NCK1P16333 377 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 LBPP18428 481 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 CYP51A1Q16850 503 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 RABL3Q5HYI8 236 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 PIK3R6Q5UE93 754 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 BEND5Q7L4P6 421 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 METTL23Q86XA0 190 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF354CQ86Y25 554 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 BBS5Q8N3I7 341 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 DNAJB14Q8TBM8 379 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 MIPOL1Q8TD10 442 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 SEPT8Q92599 483 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 ITFG2Q969R8 447 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 SDR39U1Q9NRG7 319 aaPredicted RBP13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 UXTQ9UBK9 157 aaPredicted RBP13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 ST3GAL5Q9UNP4 418 aa13.21□□□□□ -0.3
SLC28A1-201ENST00000286749 ANKRD36A6QL64 1941 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 LDB2O43679 373 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 B3GAT3O94766 335 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 MATN4O95460 622 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 MTHFD2P13995 350 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 DIO3P55073 304 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 PMS2P3Q13401 168 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 FBXO48Q5FWF7 155 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 BLOC1S3Q6QNY0 202 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 LYSMD3Q7Z3D4 306 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 SPRED1Q7Z699 444 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TRPV3Q8NET8 790 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ADAMTS16Q8TE57 1224 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 VPS33AQ96AX1 596 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ASB2Q96Q27 587 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 PCDHA9Q9Y5H5 950 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TRIM64A6NGJ6 449 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 GIPC1O14908 333 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 GJB3O75712 270 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ATE1O95260 518 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 GOT2P00505 430 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 MT-ND1P03886 318 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 VARSP26640 1264 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 GSK3BP49841 420 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 NFYCQ13952 458 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 SEMA3AQ14563 771 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 CCL15Q16663 113 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 TMTC4Q5T4D3 741 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
SLC28A1-201ENST00000286749 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms