RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 BTN2A3PQ96KV6 586 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TBATAQ96M53 351 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 LHX5Q9H2C1 402 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ZNF490Q9ULM2 529 aaPredicted RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 ERGIC3Q9Y282 383 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 PCDHGC4Q9Y5F7 938 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 RAI2Q9Y5P3 530 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SLC25A12O75746 678 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SEC24AO95486 1093 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TSHRP16473 764 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 CCNA2P20248 432 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ITPKBP27987 946 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 FOLH1Q04609 750 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 RAPSNQ13702 412 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 LYPLAL1Q5VWZ2 237 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 CLEC6AQ6EIG7 209 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 BHLHB9Q6PI77 547 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 GALNT5Q7Z7M9 940 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ITCHQ96J02 903 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SLC38A2Q96QD8 506 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 GGA2Q9UJY4 613 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ABHD14A-ACY1A0A1B0GW23 586 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 E9PAM4 449 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 CDK14O94921 469 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 DNTTP04053 509 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SF1Q15637 639 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 FAM182AQ5T1J6 154 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 FAM46CQ5VWP2 391 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 FAAH2Q6GMR7 532 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 CCDC185Q8N715 623 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 NMUR2Q9GZQ4 415 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 NOL11Q9H8H0 719 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ZNF780BQ9Y6R6 833 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 OR2AG2A6NM03 316 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ZNF24P17028 368 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 UGT2B15P54855 530 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ARMC3Q5W041 872 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SPATA5L1Q9BVQ7 753 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 COL20A1Q9P218 1284 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 ADGRE2Q9UHX3 823 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SLC27A6Q9Y2P4 619 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 GOLGA4Q13439 2230 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 GLYATL1P3A0A0U1RQE8 302 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 IDH3BO43837 385 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 NOL4O94818 638 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 ITGA2P17301 1181 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 MYBPC1Q00872 1141 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TRIM40Q6P9F5 258 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 FAM220AQ7Z4H9 259 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 RDH11Q8TC12 318 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 B3GALT6Q96L58 329 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 GPR21Q99679 349 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 FANCEQ9HB96 536 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TMCO1Q9UM00 188 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 AP4B1Q9Y6B7 739 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 A8MUI8 341 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PRMT5O14744 637 aaPredicted RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 SUV39H1O43463 412 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 NRP2O60462 931 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 MT-CYBP00156 380 aaPredicted RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 ASGR1P07306 291 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 GLUD2P49448 558 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PTPN5P54829 565 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 CBX2Q14781 532 aaPredicted RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 KCNA10Q16322 511 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 C9orf64Q5T6V5 341 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 ANKRD22Q5VYY1 191 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 HPS6Q86YV9 775 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SPPL2CQ8IUH8 684 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SFRP1Q8N474 314 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 OR7D4Q8NG98 312 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SPPL2BQ8TCT7 592 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 FEM1CQ96JP0 617 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 WRAP53Q9BUR4 548 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 KLHL31Q9H511 634 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 INTS7Q9NVH2 962 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 CACNB4O00305 520 aaPredicted RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 ENPP3O14638 875 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 TRBC1P01850 177 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 SPIRE1Q08AE8 756 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 PEX6Q13608 980 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 RBM44Q6ZP01 1051 aaKnown RBP11.44□□□□□ -0.58
USP53-201ENST00000274030 POC5Q8NA72 575 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 ING5Q8WYH8 240 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 CPT1BQ92523 772 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 RELTQ969Z4 430 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 ZHX1-C8orf76Q96EF9 292 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 COQ7Q99807 217 aa11.44□□□□□ -0.58
USP53-201ENST00000274030 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms