RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 BTBD10Q9BSF8 475 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 SLC15A5A6NIM6 579 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 CA12O43570 354 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PIM1P11309 404 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PNLIPRP1P54315 467 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 SELENOVP59797 346 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 INTS6LQ5JSJ4 861 aaKnown RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PERM1Q5SV97 790 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 ZYG11BQ9C0D3 744 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 POLMQ9NP87 494 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 ADAM28Q9UKQ2 775 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 SAMD4AQ9UPU9 718 aaKnown RBP13.25□□□□□ -0.29
PRDM16-201ENST00000270722 ATRXP46100 2492 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 IFNA10P01566 189 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 IFNA4P05014 189 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 CLCN5P51795 746 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PRMT2P55345 433 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 FAM13CQ8NE31 585 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 ACTL9Q8TC94 416 aa13.25□□□□□ -0.29
PRDM16-201ENST00000270722 CRATP43155 626 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 LARS2Q15031 903 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 GPAT3Q53EU6 434 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 RIPOR1Q6ZS17 1223 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ZSCAN1Q8NBB4 408 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SGCDQ92629 289 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 NELL1Q92832 810 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 C9J4A7 227 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ZNF286BP0CG31 522 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 HSD3B1P14060 373 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 IL1R1P14778 569 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ZNF720Q7Z2F6 126 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CLIP3Q96DZ5 547 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CLOCKO15516 846 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SCN2BO60939 215 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CASP1P29466 404 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 BUD31P41223 144 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 MATKP42679 507 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 AFF1P51825 1210 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 KAT2BQ92831 832 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 C5orf34Q96MH7 638 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 NKIRAS2Q9NYR9 191 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 UPB1Q9UBR1 384 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CIB4A0PJX0 185 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 IPO13O94829 963 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 KCNA5P22460 613 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SLC6A2P23975 617 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SLC6A3Q01959 620 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 DEFB115Q30KQ5 88 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 TFAP2DQ7Z6R9 452 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 PCDH19Q8TAB3 1148 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 PCDHGB1Q9Y5G3 927 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ALG5Q9Y673 324 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 RAD51CO43502 376 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 REM1O75628 298 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 PRKD3O94806 890 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 FGF1P05230 155 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 MTHFD1P11586 935 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 CDKL1Q00532 357 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 TTMPQ5BVD1 217 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 DHRSXQ8N5I4 330 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 WNT8BQ93098 351 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 HTR7P34969 479 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ERVK-24P63145 666 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 TMPRSS11AQ6ZMR5 421 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 FAM234BA2RU67 622 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 RAB5CP51148 216 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 FKBP1AP62942 108 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 IL18R1Q13478 541 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 NEPROQ6NW34 567 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 TDRD1Q9BXT4 1180 aaKnown RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-201ENST00000270722 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
PRDM16-201ENST00000270722 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ISM1B1AKI9 464 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ATP6V1G2-DDX39BF2Z307 99 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HSPA12AO43301 675 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 SERPINA3P01011 423 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 MAPKAPK3Q16644 382 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 FBXO30Q8TB52 745 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 TAPBPLQ9BX59 468 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms