RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TNK2Q07912 1038 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 ZIK1Q3SY52 487 aaPredicted RBP16.87■□□□□ 0.29
RTN1-201ENST00000267484 PYCR3Q53H96 274 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 SIRPB2Q5JXA9 342 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 IQSEC1Q6DN90 963 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 CIR1Q86X95 450 aaPredicted RBP16.87■□□□□ 0.29
RTN1-201ENST00000267484 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 PSMG2Q969U7 264 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 C1orf50Q9BV19 199 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 CHCHD3Q9NX63 227 aaKnown RBP16.87■□□□□ 0.29
RTN1-201ENST00000267484 ZNF711Q9Y462 761 aa16.87■□□□□ 0.29
RTN1-201ENST00000267484 BOLA2-SMG1P6H3BVE0 249 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ACOX3O15254 700 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 MYF6P23409 242 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ZNF33AQ06730 810 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 INPP5AQ14642 412 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ZBED5Q49AG3 693 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ALFQ53S48 1182 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 PAGE3Q5JUK9 113 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 HACD2Q6Y1H2 254 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 PHYKPLQ8IUZ5 450 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 RTL3Q8N8U3 475 aaKnown RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 OR13C4Q8NGS5 318 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 SLC25A51Q9H1U9 297 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 OSER1Q9NX31 292 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 EVLQ9UI08 416 aaPredicted RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 IKZF3Q9UKT9 509 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 FADS3Q9Y5Q0 445 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ITGB1P05556 798 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 MMP2P08253 660 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 MTHFD2P13995 350 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 CCT8P50990 548 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ATP6V0D1P61421 351 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 POLD3Q15054 466 aaPredicted RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 SLC36A3Q495N2 470 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 PIK3R6Q5UE93 754 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 TBPL2Q6SJ96 375 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 SCD5Q86SK9 330 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 LZTR1Q8N653 840 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 L3HYPDHQ96EM0 354 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 AGO3Q9H9G7 860 aaKnown RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 ABCD2Q9UBJ2 740 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 ST3GAL5Q9UNP4 418 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 FAM50BQ9Y247 325 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 MIA3Q5JRA6 1907 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 PCSK1P29120 753 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 PLIN5Q00G26 463 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 RAB39AQ14964 217 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 OTUD3Q5T2D3 398 aaPredicted RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 IRGQQ8WZA9 623 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 IMP4Q96G21 291 aaKnown RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 PAIP1Q9H074 479 aaKnown RBP16.86■□□□□ 0.29
RTN1-201ENST00000267484 GMEB1Q9Y692 573 aa16.86■□□□□ 0.29
RTN1-201ENST00000267484 GOT2P00505 430 aaKnown RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 GSK3BP49841 420 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 ZNF135P52742 658 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 EIF4EBP2Q13542 120 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 NFYCQ13952 458 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 GALNT3Q14435 633 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 PCBP1Q15365 356 aaKnown RBP eCLIP16.85■□□□□ 0.29
RTN1-201ENST00000267484 KCTD21Q4G0X4 260 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 TRIM74Q86UV6 250 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 TRIM73Q86UV7 250 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 SCN4BQ8IWT1 228 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 MFSD2AQ8NA29 543 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 ITFG2Q969R8 447 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 VPS50Q96JG6 964 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 A0A1W2PQH9 124 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 H3BMQ9 156 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 FGF10O15520 208 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 GRIK1P39086 918 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 SLC14A2Q15849 920 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 ATP6AP1Q15904 470 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 AARS2Q5JTZ9 985 aaKnown RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 TIGD7Q6NT04 549 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 ZUFSPQ96AP4 578 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 CENPNQ96H22 339 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 COG8Q96MW5 612 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 BIRC8Q96P09 236 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 ACOX2Q99424 681 aa16.85■□□□□ 0.29
RTN1-201ENST00000267484 MAGED1Q9Y5V3 778 aaPredicted RBP16.85■□□□□ 0.29
RTN1-201ENST00000267484 ASPDHA6ND91 283 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 CLASP2O75122 1294 aaKnown RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 WISP3O95389 354 aaPredicted RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 GALNT1Q10472 559 aaPredicted RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 BNIP3Q12983 259 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 INTS11Q5TA45 600 aaKnown RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 MARC1Q5VT66 337 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 AGMOQ6ZNB7 445 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 BBS5Q8N3I7 341 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 PGBD5Q8N414 524 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 NAT16Q8N8M0 369 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 THAP11Q96EK4 314 aa16.84■□□□□ 0.29
RTN1-201ENST00000267484 RPF2Q9H7B2 306 aaKnown RBP16.84■□□□□ 0.29
RTN1-201ENST00000267484 FNDC1Q4ZHG4 1894 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms